RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MORN2Q502X0 79 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 STPG4Q8N801 248 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CARD19Q96LW7 228 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 THAP10Q9P2Z0 257 aaPredicted RBP5.18□□□□□ -1.58
VCAN-203ENST00000343200 CD7P09564 240 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CD27P26842 260 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 APOBEC3AP31941 199 aaPredicted RBP5.18□□□□□ -1.58
VCAN-203ENST00000343200 Q0VG73 95 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGLV3-27P01718 113 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 MRPL23Q16540 153 aaKnown RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 DEFB132Q7Z7B7 95 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 RFLNBQ8N5W9 214 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 EPG5Q9HCE0 2579 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 TRAV26-1A0A087WT03 109 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 IGHV2OR16-5A0A0B4J2B6 119 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 TMEM229AB2RXF0 380 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 C9orf172C9J069 976 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 CEACAM8P31997 349 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 FAM27BQ5VT28 67 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 C18orf12Q96KH6 178 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 VGLL1Q99990 258 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 PHF7Q9BWX1 381 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 ANAPC10Q9UM13 185 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 FOXA2Q9Y261 457 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 TRAV14DV4A0A0A6YYC5 116 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 A0A1W2PR77 199 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 H3BQ85 93 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 TM4SF1P30408 202 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 WFDC9Q8NEX5 89 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 PTH2Q96A98 100 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 ZNF625Q96I27 306 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 MESP1Q9BRJ9 268 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 INS-IGF2F8WCM5 200 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 INSP01308 110 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 COL9A1P20849 921 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 DMRTC2Q8IXT2 367 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 TRBV5-3A0A0A0MS03 114 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 CLPSL1A2RUU4 121 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 PRB4P10163 310 aaPredicted RBP5.17□□□□□ -1.58
VCAN-203ENST00000343200 MPV17P39210 176 aa5.17□□□□□ -1.58
VCAN-203ENST00000343200 LMO7DNF2Z398 122 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 ERCC8Q13216 396 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 PLA2G3Q9NZ20 509 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 USP9YO00507 2555 aaPredicted RBP5.16□□□□□ -1.58
VCAN-203ENST00000343200 NBL1P41271 181 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 ATP6V0E2Q8NHE4 81 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 RTBDNQ9BSG5 229 aaPredicted RBP5.16□□□□□ -1.58
VCAN-203ENST00000343200 PDE6HQ13956 83 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 TAL2Q16559 108 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 FOXQ1Q9C009 403 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 KIAA0040Q15053 153 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 EFNB3Q15768 340 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 GFRALQ6UXV0 394 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 SHISA5Q8N114 240 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 ZNRF1Q8ND25 227 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 G3V4G9 280 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 MYF5P13349 255 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 EGR1P18146 543 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 FAM214BQ7L5A3 538 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 OCC1Q8TAD7 63 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 FAM240AA0A1B0GVK7 77 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 SHISA8B8ZZ34 492 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 K7ERJ3 54 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 DXOO77932 396 aaKnown RBP5.16□□□□□ -1.58
VCAN-203ENST00000343200 MP68P56378 58 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 SIGLEC8Q9NYZ4 499 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 ORMDL1Q9P0S3 153 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 PRSS12P56730 875 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 BHLHA9Q7RTU4 235 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 CENPVQ7Z7K6 275 aaPredicted RBP5.16□□□□□ -1.58
VCAN-203ENST00000343200 SIGLEC12Q96PQ1 595 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 TCRBV4S1A1TA0A5B7 111 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 IGHMP01871 453 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 BTCP35070 178 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 CALYQ9NYX4 217 aa5.16□□□□□ -1.58
VCAN-203ENST00000343200 LOC102723996A0A087X1L8 192 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 HERV-K104P63124 156 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 RASL10AQ92737 203 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 RNF126Q9BV68 326 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 SCRT1Q9BWW7 348 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 TM4SF5O14894 197 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 IGLV3-25P01717 112 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 IGFBP3P17936 291 aaPredicted RBP5.15□□□□□ -1.58
VCAN-203ENST00000343200 CLEC7AQ9BXN2 247 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 MSGN1A6NI15 193 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 UPK2O00526 184 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 TIMM23O14925 209 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 ZIC3O60481 467 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 THBDP07204 575 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 CCL1P22362 96 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 MORN5Q5VZ52 161 aa5.15□□□□□ -1.58
VCAN-203ENST00000343200 TRGV11A0A075B6L2 103 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms