RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SNRPD3P62318 126 aaKnown RBP14.25□□□□□ -0.13
SYNE4-202ENST00000340477 RAB31Q13636 194 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 OR1B1Q8NGR6 318 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 CITED4Q96RK1 184 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 NRN1Q9NPD7 142 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 FAM24AA6NFZ4 105 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 CST7O76096 145 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 PET100P0DJ07 73 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 SULT1A1P50225 295 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 DEFB131AP59861 70 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 RAP2BP61225 183 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 IL15RAQ13261 267 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 OR8I2Q8N0Y5 310 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 TMEM217Q8N7C4 229 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 STPG3Q8N7X2 389 aa14.24□□□□□ -0.13
SYNE4-202ENST00000340477 KIR2DL5BA0A0G2JN68 375 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 KIR2DL5BA0A0G2JPC4 375 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 E5RGE8 158 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 UBE2CO00762 179 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 LINC00869P0C866 280 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 RPL35AP18077 110 aaKnown RBP14.23□□□□□ -0.13
SYNE4-202ENST00000340477 GATA2P23769 480 aaPredicted RBP14.23□□□□□ -0.13
SYNE4-202ENST00000340477 LRRC37A5PQ49AS3 106 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 KIR2DL5AQ8N109 375 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 KIR2DL5BQ8NHK3 375 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 DCANP1Q8TF63 244 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 SLC25A31Q9H0C2 315 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 C11orf1Q9H5F2 150 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 UQCC1Q9NVA1 299 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 RNF24Q9Y225 148 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 STAB2Q8WWQ8 2551 aa14.23□□□□□ -0.13
SYNE4-202ENST00000340477 HYPMO75409 117 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 ZNF688P0C7X2 276 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 S100A11P31949 105 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 GALR1P47211 349 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 ARL16Q0P5N6 197 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 SAMD13Q5VXD3 122 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 STHQ8IWL8 128 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 GPR82Q96P67 336 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 SLC25A22Q9H936 323 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 RETNQ9HD89 108 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 DOK5Q9P104 306 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 HIGD1AQ9Y241 93 aa14.22□□□□□ -0.13
SYNE4-202ENST00000340477 OR5G3P0C626 314 aa14.21□□□□□ -0.13
SYNE4-202ENST00000340477 ID1P41134 155 aa14.21□□□□□ -0.13
SYNE4-202ENST00000340477 PXDC1Q5TGL8 231 aa14.21□□□□□ -0.13
SYNE4-202ENST00000340477 LEMD1Q68G75 181 aa14.21□□□□□ -0.13
SYNE4-202ENST00000340477 TMEM252Q8N6L7 170 aa14.21□□□□□ -0.13
SYNE4-202ENST00000340477 SEPSECSQ9HD40 501 aaKnown RBP14.21□□□□□ -0.13
SYNE4-202ENST00000340477 IGSF23A1L1A6 192 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 ZNF124Q15973 351 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 ATP6V1FQ16864 119 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 PSMG4Q5JS54 123 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 TMEM182Q6ZP80 229 aaPredicted RBP14.2□□□□□ -0.14
SYNE4-202ENST00000340477 FAM24BQ8N5W8 94 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 ALG5Q9Y673 324 aa14.2□□□□□ -0.14
SYNE4-202ENST00000340477 UBE2L5PA0A1B0GUS4 154 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 ZNF98A6NK75 572 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 AGPAT2O15120 278 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 CAMLGP49069 296 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 MEOX2P50222 304 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 H2BFSP57053 126 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 BAXQ07812 192 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 Q6ZWC4 215 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 PPP1R1CQ8WVI7 109 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 ARL6Q9H0F7 186 aa14.19□□□□□ -0.14
SYNE4-202ENST00000340477 HUWE1Q7Z6Z7 4374 aaKnown RBP14.18□□□□□ -0.14
SYNE4-202ENST00000340477 PLP1P60201 277 aa14.18□□□□□ -0.14
SYNE4-202ENST00000340477 RGS21Q2M5E4 152 aa14.18□□□□□ -0.14
SYNE4-202ENST00000340477 SLC25A39Q9BZJ4 359 aaPredicted RBP14.18□□□□□ -0.14
SYNE4-202ENST00000340477 CSTL1Q9H114 145 aa14.18□□□□□ -0.14
SYNE4-202ENST00000340477 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
SYNE4-202ENST00000340477 TENM3Q9P273 2699 aa14.18□□□□□ -0.14
SYNE4-202ENST00000340477 H3BRN7 92 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 COX7A2P2O60397 106 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 RPL7P18124 248 aaKnown RBP14.17□□□□□ -0.14
SYNE4-202ENST00000340477 ATF4P18848 351 aaPredicted RBP14.17□□□□□ -0.14
SYNE4-202ENST00000340477 PSMB3P49720 205 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 DEFB135Q30KP9 77 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 Q6ZRG5 221 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 MGST2Q99735 147 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 SHANK2-AS3Q9BTD1 123 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 MED28Q9H204 178 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 SLC25A32Q9H2D1 315 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 OR5AC2Q9NZP5 309 aa14.17□□□□□ -0.14
SYNE4-202ENST00000340477 SPRY2O43597 315 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 EWSR1Q01844 656 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYNE4-202ENST00000340477 VWC2Q2TAL6 325 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 SCRT1Q9BWW7 348 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 ARV1Q9H2C2 271 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 WDR83OSQ9Y284 106 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 NBEAL2Q6ZNJ1 2754 aa14.16□□□□□ -0.14
SYNE4-202ENST00000340477 ELOA3CA0A087WX78 387 aaPredicted RBP14.15□□□□□ -0.14
SYNE4-202ENST00000340477 ISLRO14498 428 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 MPDU1O75352 247 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 MPC2O95563 127 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 FGF7P21781 194 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 ACTL10Q5JWF8 245 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 OR5C1Q8NGR4 320 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms