RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 LEMD1Q68G75 181 aa20.22■□□□□ 0.83
ATF4-201ENST00000337304 FXYD5Q96DB9 178 aa20.22■□□□□ 0.83
ATF4-201ENST00000337304 PARLQ9H300 379 aa20.22■□□□□ 0.83
ATF4-201ENST00000337304 TRBV7-1A0A0A6YYK4 115 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 ZNF727A8MUV8 499 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 F6UZH7 168 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 H3BUA1 57 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 DNASE2O00115 360 aaPredicted RBP20.21■□□□□ 0.83
ATF4-201ENST00000337304 NUPL2O15504 423 aaKnown RBP20.21■□□□□ 0.83
ATF4-201ENST00000337304 USF2Q15853 346 aaPredicted RBP20.21■□□□□ 0.83
ATF4-201ENST00000337304 FAM74A3Q4VXF1 159 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 STXBP6Q8NFX7 210 aa20.21■□□□□ 0.83
ATF4-201ENST00000337304 CFHR3Q02985 330 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 TMEM95Q3KNT9 176 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 CLEC19AQ6UXS0 136 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 SIGLECL1Q8N7X8 197 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 TVP23CQ96ET8 276 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 ZNF414Q96IQ9 312 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 SMIM7Q9BQ49 75 aa20.2■□□□□ 0.83
ATF4-201ENST00000337304 GAR1Q9NY12 217 aaKnown RBP20.2■□□□□ 0.83
ATF4-201ENST00000337304 ZNF674Q2M3X9 581 aa20.2■□□□□ 0.82
ATF4-201ENST00000337304 C7orf77A4D0Y5 90 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 TPPP2P59282 170 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 SHANK2-AS3Q9BTD1 123 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 A0A1W2PRE2 83 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 H3BRN7 92 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 IGLV1-40P01703 118 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 GP9P14770 177 aa20.19■□□□□ 0.82
ATF4-201ENST00000337304 SCO2A0A1W2PP80 73 aa20.18■□□□□ 0.82
ATF4-201ENST00000337304 AKR1C3P42330 323 aa20.18■□□□□ 0.82
ATF4-201ENST00000337304 TMEM88Q6PEY1 159 aa20.18■□□□□ 0.82
ATF4-201ENST00000337304 SDF2L1Q9HCN8 221 aa20.18■□□□□ 0.82
ATF4-201ENST00000337304 RPS10P5Q9NQ39 176 aa20.18■□□□□ 0.82
ATF4-201ENST00000337304 GGTLC3B5MD39 225 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 NDUFB4O95168 129 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 SRP14P37108 136 aaKnown RBP20.17■□□□□ 0.82
ATF4-201ENST00000337304 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.17■□□□□ 0.82
ATF4-201ENST00000337304 YAE1D1Q9NRH1 226 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 RHEBQ15382 184 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 ZNF343Q6P1L6 599 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 ZNF600Q6ZNG1 722 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 CBLN2Q8IUK8 224 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 ATP6V0BQ99437 205 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 KLK15Q9H2R5 256 aa20.17■□□□□ 0.82
ATF4-201ENST00000337304 TGOLN2O43493 480 aa20.16■□□□□ 0.82
ATF4-201ENST00000337304 SNRPCP09234 159 aaKnown RBP20.16■□□□□ 0.82
ATF4-201ENST00000337304 DERL1Q9BUN8 251 aa20.16■□□□□ 0.82
ATF4-201ENST00000337304 PRSS22Q9GZN4 317 aa20.16■□□□□ 0.82
ATF4-201ENST00000337304 IGHV3-35A0A0C4DH35 117 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 PF4V1P10720 104 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 TMEM14CQ9P0S9 112 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 NAT8Q9UHE5 227 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 SUMO1P63165 101 aaKnown RBP20.15■□□□□ 0.82
ATF4-201ENST00000337304 C11orf52Q96A22 123 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 USMG5Q96IX5 58 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 DUX5Q96PT3 197 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 GNB4Q9HAV0 340 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 ACANP16112 2415 aa20.15■□□□□ 0.82
ATF4-201ENST00000337304 PNRC1Q12796 327 aaPredicted RBP20.14■□□□□ 0.81
ATF4-201ENST00000337304 TMEM241Q24JQ0 296 aa20.14■□□□□ 0.81
ATF4-201ENST00000337304 NPFFR1Q9GZQ6 430 aa20.14■□□□□ 0.81
ATF4-201ENST00000337304 ZNF702PQ9H963 129 aa20.14■□□□□ 0.81
ATF4-201ENST00000337304 NBEAP1P0C6P0 100 aa20.14■□□□□ 0.81
ATF4-201ENST00000337304 SONP18583 2426 aaKnown RBP20.13■□□□□ 0.81
ATF4-201ENST00000337304 ZNF98A6NK75 572 aa20.13■□□□□ 0.81
ATF4-201ENST00000337304 TOMM20LQ6UXN7 152 aa20.13■□□□□ 0.81
ATF4-201ENST00000337304 BLNKQ8WV28 456 aa20.13■□□□□ 0.81
ATF4-201ENST00000337304 ZFAND3Q9H8U3 227 aa20.13■□□□□ 0.81
ATF4-201ENST00000337304 MYO9AB2RTY4 2548 aa20.13■□□□□ 0.81
ATF4-201ENST00000337304 LCNL1Q6ZST4 164 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 S100A7AQ86SG5 101 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 ZNF329Q86UD4 541 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 PPP5D1E7EU14 171 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 RAB9AP51151 201 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 TMEM86BQ8N661 226 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 ELOVL1Q9BW60 279 aa20.12■□□□□ 0.81
ATF4-201ENST00000337304 IGHG4P01861 327 aa20.11■□□□□ 0.81
ATF4-201ENST00000337304 CRYBB3P26998 211 aa20.11■□□□□ 0.81
ATF4-201ENST00000337304 BPIFA4PQ86YQ2 179 aa20.11■□□□□ 0.81
ATF4-201ENST00000337304 RABAC1Q9UI14 185 aa20.11■□□□□ 0.81
ATF4-201ENST00000337304 IGHV3OR16-8A0A075B7F1 116 aa20.1■□□□□ 0.81
ATF4-201ENST00000337304 BMPR1BO00238 502 aa20.1■□□□□ 0.81
ATF4-201ENST00000337304 HIST1H1EP10412 219 aaKnown RBP20.1■□□□□ 0.81
ATF4-201ENST00000337304 MYCNOSP40205 109 aa20.1■□□□□ 0.81
ATF4-201ENST00000337304 RANP62826 216 aaKnown RBP20.1■□□□□ 0.81
ATF4-201ENST00000337304 RPL23P62829 140 aaKnown RBP20.1■□□□□ 0.81
ATF4-201ENST00000337304 ZNF586Q9NXT0 402 aa20.1■□□□□ 0.81
ATF4-201ENST00000337304 H3BTX0 84 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 MRPS12O15235 138 aaKnown RBP20.09■□□□□ 0.81
ATF4-201ENST00000337304 PSMB8P28062 276 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 RELQ04864 619 aaPredicted RBP20.09■□□□□ 0.81
ATF4-201ENST00000337304 SMCO4Q9NRQ5 59 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.09■□□□□ 0.81
ATF4-201ENST00000337304 B4DEV8 164 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 TRBV12-3P01733 135 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 IGHV3-11P01762 117 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 ADIRFQ15847 76 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 C10orf99Q6UWK7 81 aa20.09■□□□□ 0.81
ATF4-201ENST00000337304 TRBV20OR9-2A0A075B6H5 130 aa20.08■□□□□ 0.8
ATF4-201ENST00000337304 A0A0G2JLM5 398 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms