RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PMVKQ15126 192 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 C9JQL5 133 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 DNAJC13O75165 2243 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 SHANK3Q9BYB0 1731 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 SLC25A45Q8N413 288 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 TDRD6O60522 2096 aaKnown RBP8.07□□□□□ -1.12
COL4A6-201ENST00000334504 CKAP5Q14008 2032 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 C5orf67F2Z3F1 127 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 MST1LQ2TV78 715 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 Q6ZWC4 215 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 Q8TAT8 98 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 B5MCH6 92 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 ZNF329Q86UD4 541 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 IGHV1-2P23083 117 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 GAS1P54826 345 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 FAM27E3Q08E93 113 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
COL4A6-201ENST00000334504 ZIC4Q8N9L1 334 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
COL4A6-201ENST00000334504 LAMB2P55268 1798 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE7O76087 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE12FP0CL80 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE12GP0CL81 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE12IP0CL82 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE4Q13068 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 MORN5Q5VZ52 161 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 COLCA1Q6ZS62 124 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 C14orf178Q8N769 122 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-201ENST00000334504 RCHY1Q96PM5 261 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 RPUSD1Q9UJJ7 312 aaKnown RBP8.06□□□□□ -1.12
COL4A6-201ENST00000334504 TPRP12270 2363 aaKnown RBP8.06□□□□□ -1.12
COL4A6-201ENST00000334504 TDRD15B5MCY1 1934 aaKnown RBP8.06□□□□□ -1.12
COL4A6-201ENST00000334504 LYPD3O95274 346 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 TIAF1O95411 115 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 F8WEM9 126 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 FCN3O75636 299 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 IGHV2-5P01817 119 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 MYOD1P15172 320 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 NMSQ5H8A3 153 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 TMEM14EPQ6UXP3 125 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 IGKV1-5P01602 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE5Q13069 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 GAGE6Q13070 117 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 CT83Q5H943 113 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 ZNF114Q8NC26 417 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 ANAPC10Q9UM13 185 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 TRAV3A0A0B4J244 114 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 NTF4P34130 210 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
COL4A6-201ENST00000334504 LYL1P12980 280 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 BSPH1Q075Z2 132 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 TMEM133Q9H2Q1 129 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 PIKFYVEQ9Y2I7 2098 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 SRSF7Q16629 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
COL4A6-201ENST00000334504 SUMO4Q6EEV6 95 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 FAM168AQ92567 244 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 VGLL1Q99990 258 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 IGKV1-12A0A0C4DH73 117 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 IGKV1D-12P01611 117 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
COL4A6-201ENST00000334504 PSCAO43653 123 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 PAX8Q06710 450 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 ERCC8Q13216 396 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 UTF1Q5T230 341 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 SPSB3Q6PJ21 355 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 K7ERJ3 54 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 SLC25A16P16260 332 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 IGFL4Q6B9Z1 124 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 HAPLN4Q86UW8 402 aa8.05□□□□□ -1.12
COL4A6-201ENST00000334504 IGLL1P15814 213 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 IGHV2-26A0A0B4J1V2 119 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 H3BMG7 143 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 FGF6P10767 208 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 CEND1Q8N111 149 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 KLHDC3Q9BQ90 382 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 LOC102723996A0A087X1L8 192 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 COX8AP10176 69 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 NEGR1Q7Z3B1 354 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 C5orf24Q7Z6I8 188 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 C1orf159Q96HA4 380 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 GFRA4Q9GZZ7 299 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 QSER1Q2KHR3 1735 aa8.04□□□□□ -1.12
COL4A6-201ENST00000334504 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 C3orf56Q8N813 242 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 TRGV9Q99603 122 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 FGFBP3Q8TAT2 258 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 LINC00479Q96M42 142 aa8.03□□□□□ -1.12
COL4A6-201ENST00000334504 A0A087WWL8 130 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms