RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MT-CO2P00403 227 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 IFNA17P01571 189 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 PPBPP02775 128 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 CD7P09564 240 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 OR5AC1P0C628 307 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 RBMY1DP0C7P1 496 aaKnown RBP4.72□□□□□ -1.65
SMG1-201ENST00000330588 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
SMG1-201ENST00000330588 SLC25A4P12235 298 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 SLC25A6P12236 298 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 ETV6P41212 452 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 ASAH1Q13510 395 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 GUCA2BQ16661 112 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 CASC10Q5T4H9 136 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 BTNL8Q6UX41 500 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 OR51S1Q8NGJ8 323 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 OR4X1Q8NH49 305 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 RNASEH2CQ8TDP1 164 aaKnown RBP4.72□□□□□ -1.65
SMG1-201ENST00000330588 CACNG8Q8WXS5 425 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 ZNF414Q96IQ9 312 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
SMG1-201ENST00000330588 GGTLC1Q9BX51 225 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 RBM38Q9H0Z9 239 aaKnown RBP4.72□□□□□ -1.65
SMG1-201ENST00000330588 TMEM231Q9H6L2 316 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 VSIRQ9H7M9 311 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 SRD5A3Q9H8P0 318 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 ENY2Q9NPA8 101 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 DKK2Q9UBU2 259 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 S4R3C0 116 aa4.72□□□□□ -1.65
SMG1-201ENST00000330588 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
SMG1-201ENST00000330588 TRAV14DV4A0A0A6YYC5 116 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 A0A0B4J2A0 478 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 CHEK1O14757 476 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 ANXA3P12429 323 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 LYL1P12980 280 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 CCR6P51684 374 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 APOC4P55056 127 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 UBE2MP61081 183 aaKnown RBP4.71□□□□□ -1.66
SMG1-201ENST00000330588 KLF9Q13886 244 aaPredicted RBP4.71□□□□□ -1.66
SMG1-201ENST00000330588 TMEM187Q14656 261 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 TMEM128Q5BJH2 165 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 RNASE12Q5GAN4 147 aaKnown RBP4.71□□□□□ -1.66
SMG1-201ENST00000330588 NMSQ5H8A3 153 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 Q6ZWC4 215 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 CCDC190Q86UF4 302 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 LRTM2Q8N967 370 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 TMEM116Q8NCL8 245 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 SLC25A21Q9BQT8 299 aaPredicted RBP4.71□□□□□ -1.66
SMG1-201ENST00000330588 SHPKQ9UHJ6 478 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 TGP01266 2768 aa4.71□□□□□ -1.66
SMG1-201ENST00000330588 A0A0G2JRQ6 117 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 A0A1B0GU03 582 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 A0A1W2PS18 150 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 FAM90A26D6RGX4 464 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TMEM50AO95807 157 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 SULT1A3P0DMM9 295 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 SULT1A4P0DMN0 295 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 YPEL3P61236 119 aaPredicted RBP4.7□□□□□ -1.66
SMG1-201ENST00000330588 PAFAH1B2P68402 229 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 RAB32Q13637 225 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 SP6Q3SY56 376 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 CST9LP1Q5W188 147 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 FAM90A2PQ658T7 463 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 LGI3Q8N145 548 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 DEFB125Q8N687 156 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 OR1S2Q8NGQ3 325 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TMEM230Q96A57 120 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 HSPB7Q9UBY9 170 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 U3KQ87 197 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 V9GYH0 126 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 GAGE12BA1L429 117 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 GAGE12HA6NDE8 117 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 NAP1L6A6NFF2 107 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 K7EQM0 130 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 EDN2P20800 178 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 CRYBB3P26998 211 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 OPRK1P41145 380 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 NUTF2P61970 127 aaKnown RBP4.7□□□□□ -1.66
SMG1-201ENST00000330588 SUPT4H1P63272 117 aaKnown RBP4.7□□□□□ -1.66
SMG1-201ENST00000330588 OXA1LQ15070 435 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 ZNF79Q15937 498 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 GUK1Q16774 197 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 IZUMO4Q1ZYL8 232 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 ODF3L2Q3SX64 289 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TMEM41BQ5BJD5 291 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TMEM268Q5VZI3 342 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 FAAP20Q6NZ36 180 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 ZNF767PQ75MW2 155 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 TOMM5Q8N4H5 51 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 UBAC2Q8NBM4 344 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 GPR146Q96CH1 333 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 GRAMD2BQ96HH9 432 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 C20orf24Q9BUV8 137 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 RHPN1-AS1Q9BWJ2 59 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 FNDC4Q9H6D8 234 aaPredicted RBP4.7□□□□□ -1.66
SMG1-201ENST00000330588 BIN3Q9NQY0 253 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 CACNG5Q9UF02 275 aa4.7□□□□□ -1.66
SMG1-201ENST00000330588 IGHV3-35A0A0C4DH35 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms