RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 SSX8Q7RTT4 187 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 TCF24Q7RTU0 167 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 LINC01551Q86U37 167 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 ZNF329Q86UD4 541 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
SRRM1-201ENST00000323848 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 G3V318 75 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 M0R143 59 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 VN1R17PQ8TDU5 208 aa10.95□□□□□ -0.66
SRRM1-201ENST00000323848 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
SRRM1-201ENST00000323848 TAS2R60P59551 318 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 FAM19A2Q8N3H0 131 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 SRIP30626 198 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 MFAP4P55083 255 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 OR5AN1Q8NGI8 311 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 OR5R1Q8NH85 324 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 IGKV1OR2-108A0A075B7D4 117 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 C21orf62Q9NYP8 219 aa10.94□□□□□ -0.66
SRRM1-201ENST00000323848 TNRC6BQ9UPQ9 1833 aaKnown RBP10.94□□□□□ -0.66
SRRM1-201ENST00000323848 TCRBV4S1A1TA0A5B7 111 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 ISLRO14498 428 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 IGHV2-70P01814 119 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 SAA4P35542 130 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
SRRM1-201ENST00000323848 NDPQ00604 133 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
SRRM1-201ENST00000323848 COX6B1P14854 86 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 PTTG1IPP53801 180 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 CFAP46Q8IYW2 2715 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 C19orf84I3L1E1 186 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 SIAH2O43255 324 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 VENTXO95231 258 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 VAMP3Q15836 100 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-201ENST00000323848 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 Q9H3A6 140 aa10.93□□□□□ -0.66
SRRM1-201ENST00000323848 PEX7O00628 323 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TMEM170AQ8WVE7 144 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 PIMREGQ9BSJ6 248 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 PITPNC1Q9UKF7 332 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TPPP2P59282 170 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 CACNG8Q8WXS5 425 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 NPPCP23582 126 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 ZNF833PQ6ZTB9 187 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 GLMPQ8WWB7 406 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 C11orf1Q9H5F2 150 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TUBA4BQ9H853 241 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
SRRM1-201ENST00000323848 TRGV3P03979 118 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 HOXA5P20719 270 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
SRRM1-201ENST00000323848 EFNA4P52798 201 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 RHOGP84095 191 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 FAM120AOSQ5T036 256 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 TBX15Q96SF7 602 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 EREGO14944 169 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 CIARTQ8N365 385 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-201ENST00000323848 TMEM256Q8N2U0 113 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 RNF2Q99496 336 aa10.91□□□□□ -0.66
SRRM1-201ENST00000323848 C15orf32Q32M92 178 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 TEX45Q8NA69 505 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
SRRM1-201ENST00000323848 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 ELOA3CA0A087WX78 387 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-201ENST00000323848 CORTO00230 105 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 GOSR1O95249 250 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 C11orf42Q8N5U0 333 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 DDB2Q92466 427 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
SRRM1-201ENST00000323848 APCSP02743 223 aa10.9□□□□□ -0.67
SRRM1-201ENST00000323848 C5orf17Q8NAS9 161 aa10.9□□□□□ -0.67
SRRM1-201ENST00000323848 STXBP6Q8NFX7 210 aa10.9□□□□□ -0.67
SRRM1-201ENST00000323848 Q8TAT8 98 aa10.9□□□□□ -0.67
SRRM1-201ENST00000323848 NDFIP1Q9BT67 221 aa10.9□□□□□ -0.67
SRRM1-201ENST00000323848 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 HAX1O00165 279 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 C5orf64Q2M2E5 130 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 TMEM30BQ3MIR4 351 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 ZFP36P26651 326 aaKnown RBP10.89□□□□□ -0.67
SRRM1-201ENST00000323848 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 H3BUX3 64 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 HIST1H1EP10412 219 aaKnown RBP10.89□□□□□ -0.67
SRRM1-201ENST00000323848 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
SRRM1-201ENST00000323848 ADMP35318 185 aa10.88□□□□□ -0.67
SRRM1-201ENST00000323848 COMPP49747 757 aaPredicted RBP10.88□□□□□ -0.67
SRRM1-201ENST00000323848 LYPD6BQ8NI32 183 aa10.88□□□□□ -0.67
SRRM1-201ENST00000323848 CGB3P0DN86 165 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms