RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 IGKV1D-39P04432 117 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 PRR30Q53SZ7 412 aaPredicted RBP9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 TEPPQ6URK8 271 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 WDR83OSQ9Y284 106 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 NCKAP5O14513 1909 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 EMP1P54849 157 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 EFNB3Q15768 340 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 GFRALQ6UXV0 394 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 MPDU1O75352 247 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 EVI2AP22794 236 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 REG1BP48304 166 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 PRDM14Q9GZV8 571 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 RAB1BQ9H0U4 201 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 AMMECR1Q9Y4X0 333 aaPredicted RBP9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 DNAJC13O75165 2243 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 DHHO43323 396 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 CCL1P22362 96 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 FOXI2Q6ZQN5 318 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 NGBQ9NPG2 151 aa9.54□□□□□ -0.88
LDLRAD3-201ENST00000315571 IL4P05112 153 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 XGP55808 180 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 FOXI1Q12951 378 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 DRAM1Q8N682 238 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 NCOA6Q14686 2063 aaPredicted RBP9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 DEFB108AA8MXU0 73 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 IGHMP01871 453 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 COL8A1P27658 744 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 RAB1CQ92928 201 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 TRAV8-1A0A0A6YYK1 113 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 B4GALT1P15291 398 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 SLC35E4Q6ICL7 350 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
LDLRAD3-201ENST00000315571 hADV38S2A0JD32 116 aa9.52□□□□□ -0.88
LDLRAD3-201ENST00000315571 NTF4P34130 210 aa9.52□□□□□ -0.88
LDLRAD3-201ENST00000315571 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.88
LDLRAD3-201ENST00000315571 LY96Q9Y6Y9 160 aa9.52□□□□□ -0.88
LDLRAD3-201ENST00000315571 INTS1Q8N201 2190 aaKnown RBP9.52□□□□□ -0.88
LDLRAD3-201ENST00000315571 SMIM27A0A1W2PRY6 76 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 PRRG2O14669 202 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 FCGR3BO75015 233 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 KLRD1Q13241 179 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 COLCA1Q6ZS62 124 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 RFESDQ8TAC1 157 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 C10orf35Q96D05 121 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGKV1-6A0A0C4DH72 117 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 NPIPB13A6NJU9 1138 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 NPIPB4C9JG80 1138 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 IFITM1P13164 125 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 AAED1Q7RTV5 226 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 PTH2Q96A98 100 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZZEF1O43149 2961 aa9.52□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGHV3-9P01782 118 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 CACNA1BQ00975 2339 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 ATRXP46100 2492 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGHV3-43A0A0B4J1X8 118 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 ENSAO43768 121 aaKnown RBP9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGHV3-43DP0DP04 118 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 COL8A2P25067 703 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGHV3-13P01766 116 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
LDLRAD3-201ENST00000315571 MRPL33O75394 65 aaKnown RBP9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 AGFG2O95081 481 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 NCR2O95944 276 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 GLRXP35754 106 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 FLYWCH2Q96CP2 140 aaKnown RBP9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 PRRC2CQ9Y520 2896 aaKnown RBP9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 TMEM262E9PQX1 116 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF32P17041 273 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 PCSK4Q6UW60 755 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 MGST2Q99735 147 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 IDI2-AS1Q9NZ38 188 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGLL5B9A064 214 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 PLAUP00749 431 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF718Q3SXZ3 478 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 GDF5OSQ5U4N7 250 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 RASL11AQ6T310 242 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 DDB2Q92466 427 aa9.5□□□□□ -0.89
LDLRAD3-201ENST00000315571 HES1Q14469 280 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 RAB9BQ9NP90 201 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 IGKV3D-15A0A087WSY6 115 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms