RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SNRPGP15A8MWD9 76 aa14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 GATA2P23769 480 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 NKX2-1P43699 371 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 DEFB1P60022 68 aa14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 GDF5OSQ5U4N7 250 aa14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 MORN3Q6PF18 240 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 PAIP2BQ9ULR5 123 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 H3BMM0 161 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 DEFB4AO15263 64 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 DEFA1P59665 94 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 DEFA3P59666 94 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 C1orf194Q5T5A4 169 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 TMEM14EPQ6UXP3 125 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 TMEM217Q8N7C4 229 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 SMIM8Q96KF7 97 aa14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 RCL1Q9Y2P8 373 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 STRAPQ9Y3F4 350 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-202ENST00000308537 NUP62P37198 522 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-202ENST00000308537 NANOS2P60321 138 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-202ENST00000308537 TMEM41BQ5BJD5 291 aa14.36□□□□□ -0.11
PDZRN3-202ENST00000308537 FABP1P07148 127 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 HLA-DRB4P13762 266 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 SNRPD3P62318 126 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 TMEM144Q7Z5S9 345 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 ZBTB8BQ8NAP8 495 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 PHLDA1Q8WV24 401 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 CLEC5AQ9NY25 188 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 PSENENQ9NZ42 101 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 TBC1D24Q9ULP9 559 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 SLC45A2Q9UMX9 530 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 HLA-DRB4X5D2U9 266 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 FRAS1Q86XX4 4008 aa14.35□□□□□ -0.11
PDZRN3-202ENST00000308537 IGHV4-28A0A0C4DH34 117 aa14.34□□□□□ -0.11
PDZRN3-202ENST00000308537 SSSCA1O60232 199 aa14.34□□□□□ -0.11
PDZRN3-202ENST00000308537 IAH1Q2TAA2 248 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-202ENST00000308537 SLC25A32Q9H2D1 315 aa14.34□□□□□ -0.11
PDZRN3-202ENST00000308537 GPN1Q9HCN4 374 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-202ENST00000308537 BIRC6Q9NR09 4857 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 ZNF98A6NK75 572 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 CFDP00746 253 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 ARL16Q0P5N6 197 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 C11orf45Q8TAV5 145 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 C11orf1Q9H5F2 150 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 FBXL17Q9UF56 701 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 DNAH10Q8IVF4 4471 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 DNAH6Q9C0G6 4158 aa14.33□□□□□ -0.12
PDZRN3-202ENST00000308537 ELOA3CA0A087WX78 387 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 MBPP02686 304 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 PSMB3P49720 205 aa14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 C12orf45Q8N5I9 185 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 C20orf173Q96LM9 149 aa14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 SAV1Q9H4B6 383 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 GSKIPQ9P0R6 139 aa14.32□□□□□ -0.12
PDZRN3-202ENST00000308537 C7orf66A4D0T2 115 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 CCSO14618 274 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 IL5P05113 134 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 METTL15P1P0C7V9 234 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 MIFP14174 115 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 TAS2R30P59541 319 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 DLK1P80370 383 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 AKR1C1Q04828 323 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 OR8I2Q8N0Y5 310 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 ZNF709Q8N972 641 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 BPIFCQ8NFQ6 507 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 CLUHP3Q96NS8 147 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 SEC22CQ9BRL7 303 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 HRH4Q9H3N8 390 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 PFDN2Q9UHV9 154 aa14.31□□□□□ -0.12
PDZRN3-202ENST00000308537 C5orf51A6NDU8 294 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 FNDC10F2Z333 226 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 H3BRN7 92 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 K7EPK0 472 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 TSC22D2O75157 780 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 PLP1P60201 277 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 FOXI2Q6ZQN5 318 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 CYP2G1PQ6ZSU1 146 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 XCL2Q9UBD3 114 aa14.3□□□□□ -0.12
PDZRN3-202ENST00000308537 A8MTW9 85 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 FAM25EA8MYX2 175 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 F6UB75 175 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 ISLRO14498 428 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 PRAF2O60831 178 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 SCGB1D2O95969 90 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 ORM2P19652 201 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 IL15RAQ13261 267 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 ZNF705AQ6ZN79 300 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 SCRT1Q9BWW7 348 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 MFFQ9GZY8 342 aa14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 KLK5Q9Y337 293 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-202ENST00000308537 TRAV8-2A0A0B4J237 113 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 RRAS2P62070 204 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 PATE2Q6UY27 113 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 PPP1R14BQ96C90 147 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 LINC00052Q96N35 136 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms