RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CCL19Q99731 98 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 GBF1Q92538 1859 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 ATXN8Q156A1 80 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 PINLYPA6NC86 204 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 C9JCJ5 164 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 F2Z2F3 143 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 COQ2Q96H96 371 aa12.65□□□□□ -0.38
LEMD3-201ENST00000308330 ORMDL3Q8N138 153 aa12.65□□□□□ -0.39
LEMD3-201ENST00000308330 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.39
LEMD3-201ENST00000308330 SMPXQ9UHP9 88 aa12.65□□□□□ -0.39
LEMD3-201ENST00000308330 E9PLN8 166 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 H3BMM0 161 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 MPV17P39210 176 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 FOXI2Q6ZQN5 318 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 RNASE6Q93091 150 aaKnown RBP12.64□□□□□ -0.39
LEMD3-201ENST00000308330 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 NYNRINQ9P2P1 1898 aaKnown RBP12.64□□□□□ -0.39
LEMD3-201ENST00000308330 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 DNAL4O96015 105 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 BSPH1Q075Z2 132 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 PLA2G2CQ5R387 149 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 COLCA1Q6ZS62 124 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 PRDM14Q9GZV8 571 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 NPFFO15130 113 aa12.64□□□□□ -0.39
LEMD3-201ENST00000308330 ZNF837Q96EG3 531 aaPredicted RBP12.64□□□□□ -0.39
LEMD3-201ENST00000308330 ZNF714Q96N38 554 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 MOSP00540 346 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 LHFPL1Q86WI0 220 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 RNF125Q96EQ8 232 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 RCHY1Q96PM5 261 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 LY96Q9Y6Y9 160 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 GGTLC3B5MD39 225 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 H3BTX0 84 aa12.63□□□□□ -0.39
LEMD3-201ENST00000308330 HOXA4Q00056 320 aaPredicted RBP12.63□□□□□ -0.39
LEMD3-201ENST00000308330 MBNL2Q5VZF2 373 aaKnown RBP12.63□□□□□ -0.39
LEMD3-201ENST00000308330 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 ZNF815PA8K554 130 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 AMN1Q8IY45 258 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 KLK15Q9H2R5 256 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 NPIPB11E5RHQ5 1161 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 SCTP09683 121 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 YPEL1O60688 119 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 PTGDSP41222 190 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 FGF12P61328 243 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 YPEL2Q96QA6 119 aa12.62□□□□□ -0.39
LEMD3-201ENST00000308330 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
LEMD3-201ENST00000308330 ZIC4Q8N9L1 334 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 CCDC168Q8NDH2 2452 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 NUP35Q8NFH5 326 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 LEPP41159 167 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 KIR2DS2P43631 304 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 PRSS8Q16651 343 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 SPATA31B1PQ5VZV4 182 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 SPRR3Q9UBC9 169 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 IGKV1D-43A0A0B4J1Z2 117 aa12.61□□□□□ -0.39
LEMD3-201ENST00000308330 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.6□□□□□ -0.39
LEMD3-201ENST00000308330 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 Q0VFX4 171 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 SLC25A53Q5H9E4 307 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 IGHV3-72A0A0B4J1Y9 119 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 ZNF645Q8N7E2 425 aa12.6□□□□□ -0.39
LEMD3-201ENST00000308330 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
LEMD3-201ENST00000308330 FREM3P0C091 2139 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 GTF3C1Q12789 2109 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 APELAP0DMC3 54 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 LINC00596Q86U02 117 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 PEX7O00628 323 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 GNLYP22749 145 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 SSC4DQ8WTU2 575 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 NABP1Q96AH0 204 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 E9PQ18 207 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 TEN1Q86WV5 123 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 BRK1Q8WUW1 75 aa12.59□□□□□ -0.39
LEMD3-201ENST00000308330 A0A1W2PPI3 338 aa12.58□□□□□ -0.39
LEMD3-201ENST00000308330 TCF15Q12870 199 aa12.58□□□□□ -0.39
LEMD3-201ENST00000308330 CEND1Q8N111 149 aa12.58□□□□□ -0.39
LEMD3-201ENST00000308330 Q96M66 194 aa12.58□□□□□ -0.39
LEMD3-201ENST00000308330 TNFRSF18Q9Y5U5 241 aa12.58□□□□□ -0.39
LEMD3-201ENST00000308330 CEACAM18A8MTB9 384 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 F5H697 171 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 SLC25A20O43772 301 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 IGHMP01871 453 aa12.58□□□□□ -0.4
LEMD3-201ENST00000308330 IGFBP3P17936 291 aaPredicted RBP12.58□□□□□ -0.4
LEMD3-201ENST00000308330 ZNF138P52744 262 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms