RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 ARFGEF3Q5TH69 2177 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 IGKV1-16P04430 117 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 ESDP10768 282 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
DDB1-201ENST00000301764 HTN1P15515 57 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 ZNF503-AS2A6NEH8 195 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 EVI2AP22794 236 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 C16orf92Q96LL3 132 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 ASCL2Q99929 193 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
DDB1-201ENST00000301764 MTURNQ8N3F0 131 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
DDB1-201ENST00000301764 CENPVQ7Z7K6 275 aaPredicted RBP12.49□□□□□ -0.41
DDB1-201ENST00000301764 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
DDB1-201ENST00000301764 TNCP24821 2201 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 MMP23AO75900 390 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 DEFB123Q8N688 67 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 PPIAL4CA0A0B4J2A2 164 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 PAX2Q02962 417 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 M0R381 172 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 WDR86Q86TI4 376 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
DDB1-201ENST00000301764 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 RNASE2P10153 161 aaKnown RBP12.47□□□□□ -0.41
DDB1-201ENST00000301764 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
DDB1-201ENST00000301764 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 FRMPD3Q5JV73 1810 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 DLX6P56179 175 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 ZNF329Q86UD4 541 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 DPM2O94777 84 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 VWC2Q2TAL6 325 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 DGAT2L7PQ6IED9 249 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 SCGB3A1Q96QR1 104 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 ERVK11-1P61568 191 aa12.47□□□□□ -0.41
DDB1-201ENST00000301764 CEP350Q5VT06 3117 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 FAM168AQ92567 244 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 YPEL4Q96NS1 127 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 VKORC1Q9BQB6 163 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 RAXQ9Y2V3 346 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.41
DDB1-201ENST00000301764 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.42
DDB1-201ENST00000301764 CDKN1BP46527 198 aa12.46□□□□□ -0.42
DDB1-201ENST00000301764 KHDC1LQ5JSQ8 128 aa12.46□□□□□ -0.42
DDB1-201ENST00000301764 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.42
DDB1-201ENST00000301764 FGF23Q9GZV9 251 aaPredicted RBP12.46□□□□□ -0.42
DDB1-201ENST00000301764 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
DDB1-201ENST00000301764 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 Q8NFD4 153 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.45□□□□□ -0.42
DDB1-201ENST00000301764 F2RL2O00254 374 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 CCDC144NLQ6NUI1 221 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 C11orf1Q9H5F2 150 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 MED13Q9UHV7 2174 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 NDUFS8O00217 210 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 IGKCP01834 107 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 MEF2CQ06413 473 aaPredicted RBP12.45□□□□□ -0.42
DDB1-201ENST00000301764 PSG3Q16557 428 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 BVES-AS1Q5T3Y7 98 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 IGHV1-24A0A0C4DH33 117 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
DDB1-201ENST00000301764 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
DDB1-201ENST00000301764 SMIM27A0A1W2PRY6 76 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 C9orf172C9J069 976 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 AMN1Q8IY45 258 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 MALRD1Q5VYJ5 2156 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 K7EP13 123 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
DDB1-201ENST00000301764 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 METTL26Q96S19 204 aa12.44□□□□□ -0.42
DDB1-201ENST00000301764 ZNF106Q9H2Y7 1883 aaKnown RBP12.44□□□□□ -0.42
DDB1-201ENST00000301764 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
DDB1-201ENST00000301764 COL4A4P53420 1690 aaPredicted RBP12.43□□□□□ -0.42
DDB1-201ENST00000301764 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
DDB1-201ENST00000301764 NXT2Q9NPJ8 142 aaKnown RBP12.43□□□□□ -0.42
DDB1-201ENST00000301764 C21orf62Q9NYP8 219 aa12.43□□□□□ -0.42
DDB1-201ENST00000301764 SMAD7O15105 426 aaKnown RBP12.43□□□□□ -0.42
DDB1-201ENST00000301764 COX6CP09669 75 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms