RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 AWAT1Q58HT5 328 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 LEMD1Q68G75 181 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 CLEC19AQ6UXS0 136 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 STXBP6Q8NFX7 210 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 RPUSD4Q96CM3 377 aaKnown RBP17.76■□□□□ 0.43
PTX3-201ENST00000295927 FXYD5Q96DB9 178 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 YAE1D1Q9NRH1 226 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 GAR1Q9NY12 217 aaKnown RBP17.76■□□□□ 0.43
PTX3-201ENST00000295927 F6UZH7 168 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 TPPP2P59282 170 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 USF2Q15853 346 aaPredicted RBP17.75■□□□□ 0.43
PTX3-201ENST00000295927 PARLQ9H300 379 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 ZNF727A8MUV8 499 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 CFHR3Q02985 330 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 ZNF674Q2M3X9 581 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 TVP23CQ96ET8 276 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 SMIM7Q9BQ49 75 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 H3BRN7 92 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 IGLV1-40P01703 118 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 ZNF414Q96IQ9 312 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 SHANK2-AS3Q9BTD1 123 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 A0A1W2PRE2 83 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 DNASE2O00115 360 aaPredicted RBP17.72■□□□□ 0.43
PTX3-201ENST00000295927 PF4V1P10720 104 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 GP9P14770 177 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 FAM74A3Q4VXF1 159 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ZNF600Q6ZNG1 722 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 PRSS22Q9GZN4 317 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 KLK15Q9H2R5 256 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ACANP16112 2415 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 IGHV3-35A0A0C4DH35 117 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 SCO2A0A1W2PP80 73 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 C7orf77A4D0Y5 90 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 TGOLN2O43493 480 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 NDUFB4O95168 129 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 SNRPCP09234 159 aaKnown RBP17.72■□□□□ 0.43
PTX3-201ENST00000295927 DUX5Q96PT3 197 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ATP6V0BQ99437 205 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 GGTLC3B5MD39 225 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 AKR1C3P42330 323 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.71■□□□□ 0.43
PTX3-201ENST00000295927 NPFFR1Q9GZQ6 430 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 GNB4Q9HAV0 340 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 RPS10P5Q9NQ39 176 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 SONP18583 2426 aaKnown RBP17.71■□□□□ 0.43
PTX3-201ENST00000295927 MYO9AB2RTY4 2548 aa17.71■□□□□ 0.42
PTX3-201ENST00000295927 TMEM88Q6PEY1 159 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 USMG5Q96IX5 58 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF702PQ9H963 129 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 SDF2L1Q9HCN8 221 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 SUMO1P63165 101 aaKnown RBP17.7■□□□□ 0.42
PTX3-201ENST00000295927 RHEBQ15382 184 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF343Q6P1L6 599 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF329Q86UD4 541 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 TMEM14CQ9P0S9 112 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 NBEAP1P0C6P0 100 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 TOMM20LQ6UXN7 152 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 LCNL1Q6ZST4 164 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 S100A7AQ86SG5 101 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 CBLN2Q8IUK8 224 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 DERL1Q9BUN8 251 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 NAT8Q9UHE5 227 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 TMEM241Q24JQ0 296 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 BLNKQ8WV28 456 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 C11orf52Q96A22 123 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 ZNF98A6NK75 572 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 PPP5D1E7EU14 171 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 IGHG4P01861 327 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 RAB9AP51151 201 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 PNRC1Q12796 327 aaPredicted RBP17.68■□□□□ 0.42
PTX3-201ENST00000295927 TMEM86BQ8N661 226 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 ZFAND3Q9H8U3 227 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 HNF1AP20823 631 aa17.67■□□□□ 0.42
PTX3-201ENST00000295927 RABAC1Q9UI14 185 aa17.67■□□□□ 0.42
PTX3-201ENST00000295927 IGHV3OR16-8A0A075B7F1 116 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 BMPR1BO00238 502 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 BPIFA4PQ86YQ2 179 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 ELOVL1Q9BW60 279 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 IGHV3-11P01762 117 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 CRYBB3P26998 211 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 PSMB8P28062 276 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 RANP62826 216 aaKnown RBP17.66■□□□□ 0.42
PTX3-201ENST00000295927 A0A0G2JLM5 398 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 H3BTX0 84 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 HIST1H1EP10412 219 aaKnown RBP17.65■□□□□ 0.42
PTX3-201ENST00000295927 ARL3P36405 182 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 RELQ04864 619 aaPredicted RBP17.65■□□□□ 0.42
PTX3-201ENST00000295927 C10orf99Q6UWK7 81 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 ZNF586Q9NXT0 402 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.64■□□□□ 0.42
PTX3-201ENST00000295927 TRBV12-3P01733 135 aa17.64■□□□□ 0.42
PTX3-201ENST00000295927 MRPS12O15235 138 aaKnown RBP17.64■□□□□ 0.41
PTX3-201ENST00000295927 MYCNOSP40205 109 aa17.64■□□□□ 0.41
PTX3-201ENST00000295927 RPL23P62829 140 aaKnown RBP17.64■□□□□ 0.41
PTX3-201ENST00000295927 SMR3AQ99954 134 aa17.64■□□□□ 0.41
PTX3-201ENST00000295927 TMEM89A2RUT3 159 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 B4DEV8 164 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 ADIRFQ15847 76 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 Q8N2B8 174 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 OR4F17Q8NGA8 305 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms