RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 HYPMO75409 117 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 MPC2O95563 127 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 ZNF688P0C7X2 276 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 RPL35AP18077 110 aaKnown RBP4.88□□□□□ -1.63
CD44-204ENST00000279452 CXCL3P19876 107 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 FGF7P21781 194 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 CAMLGP49069 296 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 AP2S1P53680 142 aaPredicted RBP4.88□□□□□ -1.63
CD44-204ENST00000279452 DEFB131AP59861 70 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 SELENOTP62341 195 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 NHLH2Q02577 135 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 FGL1Q08830 312 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 IL15RAQ13261 267 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 ODF3L2Q3SX64 289 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 LEMD1Q68G75 181 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 C16orf54Q6UWD8 224 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 TMEM182Q6ZP80 229 aaPredicted RBP4.88□□□□□ -1.63
CD44-204ENST00000279452 S100A7AQ86SG5 101 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 SBSPONQ8IVN8 264 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 OR11H7Q8NGC8 314 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 OR5C1Q8NGR4 320 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 SCRT1Q9BWW7 348 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 GGTLC1Q9BX51 225 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 SMIM3Q9BZL3 60 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 ARL6Q9H0F7 186 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 MAP6D1Q9H9H5 199 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 FBXL17Q9UF56 701 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 HIGD1AQ9Y241 93 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 VWFP04275 2813 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 H0YIZ8 118 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 BUB3O43684 328 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
CD44-204ENST00000279452 ATF4P18848 351 aaPredicted RBP4.87□□□□□ -1.63
CD44-204ENST00000279452 GALR1P47211 349 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 APOC4P55056 127 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 CMC4P56277 68 aaPredicted RBP4.87□□□□□ -1.63
CD44-204ENST00000279452 SNRPD3P62318 126 aaKnown RBP4.87□□□□□ -1.63
CD44-204ENST00000279452 OXA1LQ15070 435 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 ZNF124Q15973 351 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 ATP6V1FQ16864 119 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 PSMG4Q5JS54 123 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 MIC13Q5XKP0 118 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 FAM90A2PQ658T7 463 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 Q6ZRG5 221 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 FAM24BQ8N5W8 94 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 ZNF709Q8N972 641 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 LRRC20Q8TCA0 184 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 LINC00052Q96N35 136 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 UHRF2Q96PU4 802 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 MGST2Q99735 147 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 FAM110AQ9BQ89 295 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 SPATA25Q9BR10 227 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 ARV1Q9H2C2 271 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 SLC25A32Q9H2D1 315 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 C11orf1Q9H5F2 150 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 RETNQ9HD89 108 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 C19orf73Q9NVV2 129 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 U3KQK5 164 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 TRRAPQ9Y4A5 3859 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
CD44-204ENST00000279452 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 FXYD6-FXYD2A0A087WZ82 144 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 RBMY1BA6NDE4 496 aaKnown RBP4.86□□□□□ -1.63
CD44-204ENST00000279452 RBMY1EA6NEQ0 496 aaKnown RBP4.86□□□□□ -1.63
CD44-204ENST00000279452 ZNF98A6NK75 572 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 A8MZ25 164 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 K7EQG2 157 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 IFNA5P01569 189 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 RBMY1DP0C7P1 496 aaKnown RBP4.86□□□□□ -1.63
CD44-204ENST00000279452 RPL12P30050 165 aaKnown RBP4.86□□□□□ -1.63
CD44-204ENST00000279452 ID1P41134 155 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 B2MP61769 119 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 HAGHQ16775 308 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 C1orf194Q5T5A4 169 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 C10orf113Q5VZT2 155 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 LINC00305Q7Z4B0 112 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 STHQ8IWL8 128 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 OR1L4Q8NGR5 311 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 RCHY1Q96PM5 261 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 CITED4Q96RK1 184 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 ATP5SQ99766 215 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 SHANK2-AS3Q9BTD1 123 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 SLC25A39Q9BZJ4 359 aaPredicted RBP4.86□□□□□ -1.63
CD44-204ENST00000279452 SLC45A2Q9UMX9 530 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 WDR83OSQ9Y284 106 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 HSPB11Q9Y547 144 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 PXMP4Q9Y6I8 212 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 U3KQE9 123 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 PKD1L1Q8TDX9 2849 aa4.86□□□□□ -1.63
CD44-204ENST00000279452 KNCNA6PVL3 124 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 C17orf112F2Z3M2 114 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 H3BRN7 92 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 SNRPCP09234 159 aaKnown RBP4.85□□□□□ -1.63
CD44-204ENST00000279452 GIPP09681 153 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms