RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 UNQ9165/PRO28630Q6UXU0 137 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 MDP1Q86V88 176 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 ZGRF1Q86YA3 2104 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 ZNF584Q8IVC4 421 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 PDZD9Q8IXQ8 264 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 KRTCAP2Q8N6L1 136 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 OR5W2Q8NH69 310 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 FNDC9Q8TBE3 224 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 SCGB1C1Q8TD33 95 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 SDF2Q99470 211 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 THTPAQ9BU02 230 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 SMIM3Q9BZL3 60 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 COMMD5Q9GZQ3 224 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 LPAR5Q9H1C0 372 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 FAIMQ9NVQ4 179 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 DHRS4-AS1Q9P1J3 65 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 HIGD1AQ9Y241 93 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 MED31Q9Y3C7 131 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 HIVEP3Q5T1R4 2406 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 DOPEY1Q5JWR5 2465 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 RP1L1Q8IWN7 2480 aaPredicted RBP3.33□□□□□ -1.88
CD44-202ENST00000278385 HECTD1Q9ULT8 2610 aa3.33□□□□□ -1.88
CD44-202ENST00000278385 SVILO95425 2214 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 USP9YO00507 2555 aaPredicted RBP3.32□□□□□ -1.88
CD44-202ENST00000278385 A0A0J9YW62 118 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 A0A0X1KG70 313 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 ZNF705GA8MUZ8 300 aaPredicted RBP3.32□□□□□ -1.88
CD44-202ENST00000278385 M0R381 172 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 FSTL3O95633 263 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 IGLV2-8P01709 118 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 PGAM2P15259 253 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 CRYGSP22914 178 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 S100A11P31949 105 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 GABRA2P47869 451 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 ZNF117Q03924 483 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 FOXF1Q12946 379 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 DEFB113Q30KQ7 82 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 TMEM69Q5SWH9 247 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 HRCT1Q6UXD1 115 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 SSX8Q7RTT4 187 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 ZNF429Q86V71 674 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 CLECL1Q8IZS7 167 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 OR8I2Q8N0Y5 310 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 OR5D16Q8NGK9 328 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 ITLN1Q8WWA0 313 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 TMEM190Q8WZ59 177 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 TP53RKQ96S44 253 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 SOSTQ9BQB4 213 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 MED28Q9H204 178 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 PLEKHF2Q9H8W4 249 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 CACYBPQ9HB71 228 aaKnown RBP3.32□□□□□ -1.88
CD44-202ENST00000278385 TAAR3PQ9P1P4 343 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 MARCOQ9UEW3 520 aaPredicted RBP3.32□□□□□ -1.88
CD44-202ENST00000278385 NAT8BQ9UHF3 227 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 TRAPPC2LQ9UL33 140 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
CD44-202ENST00000278385 USP9XQ93008 2570 aaPredicted RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 NCOA6Q14686 2063 aaPredicted RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 IGLV8-61A0A075B6I0 122 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 IGHV3OR16-10A0A075B7F0 116 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 A0A1B0GW64 132 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 C20orf202A1L168 122 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 FABP5P3A8MUU1 101 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 KRBOX1C9JBD0 128 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 M0R2Z0 102 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 TRAF3IP2O43734 574 aaPredicted RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 DEDDO75618 318 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 CXorf1O96002 111 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 LPAR6P43657 344 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 LINC00313P59037 77 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 DHRS2Q13268 280 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 Q6Q795 121 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 Q6ZS49 121 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 HSD17B13Q7Z5P4 300 aaPredicted RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 MKXQ8IYA7 352 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 ZNF440Q8IYI8 595 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 TCTE3Q8IZS6 198 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 OR51T1Q8NGJ9 327 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 ZNF563Q8TA94 476 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 SLC25A40Q8TBP6 338 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 ISOC1Q96CN7 298 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 PHYHIPLQ96FC7 376 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 TEX37Q96LM6 180 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 RPUSD1Q9UJJ7 312 aaKnown RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 PTPN13Q12923 2485 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 DIDO1Q9BTC0 2240 aaKnown RBP3.31□□□□□ -1.88
CD44-202ENST00000278385 CACNA1DQ01668 2161 aa3.31□□□□□ -1.88
CD44-202ENST00000278385 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 CLDN25C9JDP6 229 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 375.9 ms