RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HSBP1L1C9JCN9 74 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 VMA21Q3ZAQ7 101 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 C5orf17Q8NAS9 161 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 MUC21A0A0G2JKD1 596 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 MUC21A0A140T8X8 626 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 SPAARA0A1B0GVQ0 90 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 MUC21Q5SSG8 566 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 SLC25A34Q6PIV7 304 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 RBPMS2Q6ZRY4 209 aaKnown RBP13.97□□□□□ -0.17
TRAM1-201ENST00000262213 WFDC8Q8IUA0 241 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 TPPP3Q9BW30 176 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 TEX36Q5VZQ5 186 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 GOLT1AQ6ZVE7 132 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 STXBP6Q8NFX7 210 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 TMUB1Q9BVT8 246 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 PRSS22Q9GZN4 317 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 KLF12Q9Y4X4 402 aa13.97□□□□□ -0.17
TRAM1-201ENST00000262213 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 OR2T8A6NH00 312 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 IGFL2Q6UWQ7 119 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 DMXL2Q8TDJ6 3036 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 LOC102724200A0A096LPH7 203 aaPredicted RBP13.96□□□□□ -0.17
TRAM1-201ENST00000262213 C19orf71A6NCJ1 209 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 LTAP01374 205 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 HTR1DP28221 377 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 TMEM30BQ3MIR4 351 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 FMC1Q96HJ9 113 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 ST20Q9HBF5 79 aa13.96□□□□□ -0.17
TRAM1-201ENST00000262213 A0A087X0K7 114 aa13.95□□□□□ -0.18
TRAM1-201ENST00000262213 GP9P14770 177 aa13.95□□□□□ -0.18
TRAM1-201ENST00000262213 TCTAP57738 103 aa13.95□□□□□ -0.18
TRAM1-201ENST00000262213 FAM162BQ5T6X4 162 aa13.95□□□□□ -0.18
TRAM1-201ENST00000262213 CHCHD1Q96BP2 118 aaKnown RBP13.95□□□□□ -0.18
TRAM1-201ENST00000262213 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
TRAM1-201ENST00000262213 TNFRSF1AP19438 455 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 ZADH2Q8N4Q0 377 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 DEFB124Q8NES8 71 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 OR4A5Q8NH83 315 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 ZC2HC1AQ96GY0 325 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 INS-IGF2F8WCM5 200 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 TAX1BP3O14907 124 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 NDUFB3O43676 98 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
TRAM1-201ENST00000262213 BVES-AS1Q5T3Y7 98 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 ETFRF1Q6IPR1 90 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 TMEM186Q96B77 213 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 KALRNO60229 2985 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 MALRD1Q5VYJ5 2156 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 PPIAL4EA0A075B759 164 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.94□□□□□ -0.18
TRAM1-201ENST00000262213 PPIAL4DF5H284 164 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 PPIAL4FP0DN26 164 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
TRAM1-201ENST00000262213 LRRC10Q5BKY1 277 aa13.94□□□□□ -0.18
TRAM1-201ENST00000262213 FOXE3Q13461 319 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 C1orf185Q5T7R7 199 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 Q86TA4 180 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
TRAM1-201ENST00000262213 C17orf100A8MU93 164 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 CRXO43186 299 aaPredicted RBP13.93□□□□□ -0.18
TRAM1-201ENST00000262213 RBP4P02753 201 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 LIPFP07098 398 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 PSG1P11464 419 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 AMMECR1LQ6DCA0 310 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 TRGV9Q99603 122 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 SH3BGRL2Q9UJC5 107 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 HIGD1AQ9Y241 93 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 SELENOKQ9Y6D0 94 aa13.93□□□□□ -0.18
TRAM1-201ENST00000262213 ZGRF1Q86YA3 2104 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 TEX45Q8NA69 505 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 ZNF492Q9P255 531 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 K7EP13 123 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 ARMS2P0C7Q2 107 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 ADIPOQQ15848 244 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 CTSZQ9UBR2 303 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 ADGRG4Q8IZF6 3080 aa13.92□□□□□ -0.18
TRAM1-201ENST00000262213 APOHP02749 345 aaPredicted RBP13.91□□□□□ -0.18
TRAM1-201ENST00000262213 OR5AL1P0C617 328 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 C8orf46Q8TAG6 207 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 C17orf77Q96MU5 243 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 CT83Q5H943 113 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 LDLRAD2Q5SZI1 272 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
TRAM1-201ENST00000262213 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
TRAM1-201ENST00000262213 TRAV30A0A087WSZ9 112 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 CRYGCP07315 174 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 ARF6P62330 175 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 SMIM12Q96EX1 92 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 A0A1W2PRD5 423 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 A0A1W2PRF3 423 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 A0A1W2PRM7 423 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 KLK10O43240 276 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 NDFIP1Q9BT67 221 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 TACC2O95359 2948 aa13.9□□□□□ -0.18
TRAM1-201ENST00000262213 LOC389332A0A1B0GUA5 103 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 TMEM178BH3BS89 294 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 NCR2O95944 276 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms