RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PXDC1Q5TGL8 231 aa15.82■□□□□ 0.12
RTCA-201ENST00000260563 DPPA3Q6W0C5 159 aa15.82■□□□□ 0.12
RTCA-201ENST00000260563 GPHB5Q86YW7 130 aa15.82■□□□□ 0.12
RTCA-201ENST00000260563 DOK5Q9P104 306 aa15.82■□□□□ 0.12
RTCA-201ENST00000260563 WI2-2373I1.2A0A1W2PRP0 233 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 ORM2P19652 201 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 FHITP49789 147 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 FAM106AQ4KMX7 169 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 OR1L4Q8NGR5 311 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 OR1B1Q8NGR6 318 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 LRRC20Q8TCA0 184 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 RNF125Q96EQ8 232 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 PFDN5Q99471 154 aa15.81■□□□□ 0.12
RTCA-201ENST00000260563 ZNF705EA8MWA4 302 aaPredicted RBP15.8■□□□□ 0.12
RTCA-201ENST00000260563 COX7A2P2O60397 106 aa15.8■□□□□ 0.12
RTCA-201ENST00000260563 RPP25LQ8N5L8 163 aaKnown RBP15.8■□□□□ 0.12
RTCA-201ENST00000260563 FAM213BQ8TBF2 198 aa15.8■□□□□ 0.12
RTCA-201ENST00000260563 TMEM37Q8WXS4 190 aa15.8■□□□□ 0.12
RTCA-201ENST00000260563 PBDC1Q9BVG4 233 aa15.8■□□□□ 0.12
RTCA-201ENST00000260563 DNAJC4Q9NNZ3 241 aa15.8■□□□□ 0.12
RTCA-201ENST00000260563 NDUFA4O00483 81 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 HYPMO75409 117 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 FAM122CQ6P4D5 195 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 TOMM20LQ6UXN7 152 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 PATE2Q6UY27 113 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 REC114Q7Z4M0 266 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 GATAD1Q8WUU5 269 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 ZFAND3Q9H8U3 227 aa15.79■□□□□ 0.12
RTCA-201ENST00000260563 ELOA3CA0A087WX78 387 aaPredicted RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 LGALS9O00182 355 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 OR5G3P0C626 314 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 C10orf113Q5VZT2 155 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 WFDC9Q8NEX5 89 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 OR9G4Q8NGQ1 327 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 RCC1LQ96I51 464 aaKnown RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 ACTR3CQ9C0K3 210 aaPredicted RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 PEMTQ9UBM1 199 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 ZNF320A2RRD8 509 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 CDC34P49427 236 aaPredicted RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 RAB14P61106 215 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 RHOBP62745 196 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 USF2Q15853 346 aaPredicted RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 FAM78BQ5VT40 261 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 PCNPQ8WW12 178 aaKnown RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 TMEM190Q8WZ59 177 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 SAT2Q96F10 170 aaPredicted RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 RNF2Q99496 336 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 MCRIP2Q9BUT9 160 aaKnown RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 SEPSECSQ9HD40 501 aaKnown RBP15.78■□□□□ 0.12
RTCA-201ENST00000260563 HIGD1AQ9Y241 93 aa15.78■□□□□ 0.12
RTCA-201ENST00000260563 A0A1W2PPV4 95 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 SEC14L6B5MCN3 397 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 ZNF726P1Q15940 193 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 UNQ9165/PRO28630Q6UXU0 137 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 ELOVL1Q9BW60 279 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 SLC25A22Q9H936 323 aa15.77■□□□□ 0.11
RTCA-201ENST00000260563 MRPL27Q9P0M9 148 aaKnown RBP15.77■□□□□ 0.11
RTCA-201ENST00000260563 PKD1L1Q8TDX9 2849 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 IGHV3OR16-8A0A075B7F1 116 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 CTXND1A0A1B0GTU2 59 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 A8MWP6 167 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 NMBP08949 121 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 BLOC1S1P78537 153 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 SSX7Q7RTT5 188 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 LINC00305Q7Z4B0 112 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 UHRF2Q96PU4 802 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 C20orf24Q9BUV8 137 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 MRPL32Q9BYC8 188 aaKnown RBP15.76■□□□□ 0.11
RTCA-201ENST00000260563 FUT9Q9Y231 359 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 UFC1Q9Y3C8 167 aa15.76■□□□□ 0.11
RTCA-201ENST00000260563 CLLU1Q5K131 121 aa15.75■□□□□ 0.11
RTCA-201ENST00000260563 SPATA31B1PQ5VZV4 182 aa15.75■□□□□ 0.11
RTCA-201ENST00000260563 RAB24Q969Q5 203 aa15.75■□□□□ 0.11
RTCA-201ENST00000260563 RABAC1Q9UI14 185 aa15.75■□□□□ 0.11
RTCA-201ENST00000260563 EIF3GO75821 320 aaKnown RBP eCLIP15.74■□□□□ 0.11
RTCA-201ENST00000260563 H2AFB1P0C5Y9 115 aa15.74■□□□□ 0.11
RTCA-201ENST00000260563 IGLL1P15814 213 aa15.74■□□□□ 0.11
RTCA-201ENST00000260563 MIR17HGQ75NE6 70 aa15.74■□□□□ 0.11
RTCA-201ENST00000260563 SAP30O75446 220 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 C9orf66Q5T8R8 295 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 S100A7AQ86SG5 101 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 SLC25A39Q9BZJ4 359 aaPredicted RBP15.73■□□□□ 0.11
RTCA-201ENST00000260563 GPR61Q9BZJ8 451 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 DAZ1Q9NQZ3 744 aaKnown RBP15.73■□□□□ 0.11
RTCA-201ENST00000260563 TMEM213A2RRL7 107 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 MAP1LC3B2A6NCE7 125 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 HMGB3O15347 200 aaKnown RBP15.73■□□□□ 0.11
RTCA-201ENST00000260563 MORN5Q5VZ52 161 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 LCN15Q6UWW0 184 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 SFT2D1Q8WV19 159 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 MBD3L1Q8WWY6 194 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 METTL26Q96S19 204 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 MAP1LC3BQ9GZQ8 125 aa15.73■□□□□ 0.11
RTCA-201ENST00000260563 C2orf70A6NJV1 201 aa15.72■□□□□ 0.11
RTCA-201ENST00000260563 H3BRN7 92 aa15.72■□□□□ 0.11
RTCA-201ENST00000260563 S100A7P31151 101 aa15.72■□□□□ 0.11
RTCA-201ENST00000260563 TM4SF20Q53R12 229 aa15.72■□□□□ 0.11
RTCA-201ENST00000260563 SHANK2-AS3Q9BTD1 123 aa15.72■□□□□ 0.11
RTCA-201ENST00000260563 TECRQ9NZ01 308 aaKnown RBP15.72■□□□□ 0.11
RTCA-201ENST00000260563 TRAV5A0A0B4J249 113 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms