RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 NUP35Q8NFH5 326 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 FMC1Q96HJ9 113 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 STARD6P59095 220 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 ZNF497Q6ZNH5 498 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 ZNF48Q96MX3 618 aaPredicted RBP6.21□□□□□ -1.42
RIF1-201ENST00000243326 A0A1W2PS18 150 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 TNFRSF14Q92956 283 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 CEACAM4O75871 244 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 HBDP02042 147 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A2PQ658T7 463 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 IGHV2-70P01814 119 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 RSPO3Q9BXY4 272 aaPredicted RBP6.21□□□□□ -1.42
RIF1-201ENST00000243326 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 TRPM7Q96QT4 1865 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 CD7P09564 240 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 VWCEQ96DN2 955 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 TREML4Q6UXN2 200 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FLVCR1-AS1Q8TAF5 88 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 A8MWP6 167 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 NPPCP23582 126 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 EEF1AKMT3Q96AZ1 226 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 PPP1R27Q86WC6 154 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 IGLV3-21P80748 117 aaPredicted RBP6.2□□□□□ -1.42
RIF1-201ENST00000243326 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 TMEM249Q2WGJ8 235 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 PRB2P02812 416 aaPredicted RBP6.2□□□□□ -1.42
RIF1-201ENST00000243326 MC5RP33032 325 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A10PA6NDY2 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A18PA6NE21 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A16PA6NEW6 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A20PA6NIJ5 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A8PA6NJQ4 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A7PA6NKC0 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A22PA8MWA6 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A12PA8MX19 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A5PA8MXJ8 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A23PA8MXZ1 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 SH2D1AO60880 128 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A15PP0C7V4 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A13PP0C7W8 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A14PP0C7W9 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FAM90A24PP0C7X0 464 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
RIF1-201ENST00000243326 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 CITED1Q99966 193 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 PSPNO60542 156 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 RPS20P60866 119 aaKnown RBP6.2□□□□□ -1.42
RIF1-201ENST00000243326 MORN2Q502X0 79 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 TMEM158Q8WZ71 300 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 PMS2P5A8MQ11 134 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 LY6HO94772 140 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 CFHR2P36980 270 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 FOXF2Q12947 444 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 SPSB3Q6PJ21 355 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 RNF182Q8N6D2 247 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 EDA2RQ9HAV5 297 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 OTORQ9NRC9 128 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 QRFPP83859 136 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
RIF1-201ENST00000243326 DNAL4O96015 105 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SAP25Q8TEE9 199 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 KIR2DL4Q99706 377 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SLC25A39Q9BZJ4 359 aaPredicted RBP6.19□□□□□ -1.42
RIF1-201ENST00000243326 SSBP2P81877 361 aaPredicted RBP6.19□□□□□ -1.42
RIF1-201ENST00000243326 TMEM186Q96B77 213 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 MPZP25189 248 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 CNTFRP26992 372 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SBF1O95248 1867 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 LINC00473A8K010 186 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 MGAMO43451 1857 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 NEUROG1Q92886 237 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 AGMATQ9BSE5 352 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 LINC01587Q99440 93 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 GGTLC1Q9BX51 225 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 LTBP4Q8N2S1 1624 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 A0A087WWL8 130 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 C15orf61A6NNL5 157 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 OSTCQ9NRP0 149 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 C21orf62Q9NYP8 219 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SPRR3Q9UBC9 169 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 TCRBV4S1A1TA0A5B7 111 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 TDRG1Q3Y452 100 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 COX11Q9Y6N1 276 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
RIF1-201ENST00000243326 ZNF524Q96C55 264 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 HSD52Q0P140 79 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 C1orf174Q8IYL3 243 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 ZIC4Q8N9L1 334 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 PCNX3Q9H6A9 2034 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 SRSF6Q13247 344 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms