RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
VEGFA-201ENST00000230480 S100A6P06703 90 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 RAB5BP61020 215 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-201ENST00000230480 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-201ENST00000230480 SLC16A13Q7RTY0 426 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 CACFD1Q9UGQ2 172 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 TRAV25A0A0B4J276 109 aa10.22□□□□□ -0.77
VEGFA-201ENST00000230480 GATCO43716 136 aaKnown RBP10.22□□□□□ -0.77
VEGFA-201ENST00000230480 MBPP02686 304 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-201ENST00000230480 CRYBB3P26998 211 aa10.22□□□□□ -0.77
VEGFA-201ENST00000230480 GPX4P36969 197 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-201ENST00000230480 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-201ENST00000230480 ARL16Q0P5N6 197 aa10.22□□□□□ -0.77
VEGFA-201ENST00000230480 USF2Q15853 346 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-201ENST00000230480 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 H3BP45 60 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 YIF1AO95070 293 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 OR10J1P30954 320 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-201ENST00000230480 CD81P60033 236 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 ZNF90Q03938 601 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 IAH1Q2TAA2 248 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-201ENST00000230480 TMEM14EPQ6UXP3 125 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 SMIM8Q96KF7 97 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 TM2D3Q9BRN9 247 aa10.21□□□□□ -0.77
VEGFA-201ENST00000230480 PSG1P11464 419 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 TPT1P13693 172 aaKnown RBP10.2□□□□□ -0.78
VEGFA-201ENST00000230480 NKX2-1P43699 371 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-201ENST00000230480 HAGHQ16775 308 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 FAM24BQ8N5W8 94 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 THAP8Q8NA92 274 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 OR1S2Q8NGQ3 325 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 ACY3Q96HD9 319 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 C17orf77Q96MU5 243 aa10.2□□□□□ -0.78
VEGFA-201ENST00000230480 ZNF471Q9BX82 626 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-201ENST00000230480 DYNC2H1Q8NCM8 4307 aaKnown RBP10.19□□□□□ -0.78
VEGFA-201ENST00000230480 TRAV30A0A087WSZ9 112 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 PIGBOS1A0A0B4J2F0 54 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 OR11H12B2RN74 326 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 MED6O75586 246 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 DFFBO76075 338 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 FABP1P07148 127 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 S100PP25815 95 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 ZNF124Q15973 351 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 RNF212Q495C1 297 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 SPANXN5Q5MJ07 72 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 C15orf54Q8N8G6 183 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 THAP6Q8TBB0 222 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 RNF141Q8WVD5 230 aa10.19□□□□□ -0.78
VEGFA-201ENST00000230480 SAT2Q96F10 170 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-201ENST00000230480 KMT2CQ8NEZ4 4911 aaKnown RBP10.18□□□□□ -0.78
VEGFA-201ENST00000230480 UBE2CO00762 179 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 TOMM40O96008 361 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 IFNA21P01568 189 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 NHLRC4P0CG21 123 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-201ENST00000230480 EIF5AP63241 154 aaKnown RBP10.18□□□□□ -0.78
VEGFA-201ENST00000230480 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 INO80EQ8NBZ0 244 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-201ENST00000230480 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 SPAG8Q99932 426 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-201ENST00000230480 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
VEGFA-201ENST00000230480 STARD9Q9P2P6 4700 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 K7EPK0 472 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 SSSCA1O60232 199 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 ADCYAP1P18509 176 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 GATA2P23769 480 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-201ENST00000230480 PEA15Q15121 130 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 FAM74A1Q5RGS3 127 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 ETFRF1Q6IPR1 90 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 C2orf50Q96LR7 162 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 CIB3Q96Q77 187 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-201ENST00000230480 SRD5A3Q9H8P0 318 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 GSKIPQ9P0R6 139 aa10.17□□□□□ -0.78
VEGFA-201ENST00000230480 H0YIZ8 118 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 BUB3O43684 328 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
VEGFA-201ENST00000230480 RD3LP0DJH9 198 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 SPP1P10451 314 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 NPPCP23582 126 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 CYCSP99999 105 aaKnown RBP10.16□□□□□ -0.78
VEGFA-201ENST00000230480 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
VEGFA-201ENST00000230480 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 CBLN2Q8IUK8 224 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 GBGT1Q8N5D6 347 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 OR51G1Q8NGK1 321 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 TRGV9Q99603 122 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 RETNQ9HD89 108 aa10.16□□□□□ -0.78
VEGFA-201ENST00000230480 STRAPQ9Y3F4 350 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms