RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 LY6EQ16553 131 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 C16orf82Q7Z2V1 217 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
CCDC47-201ENST00000225726 PARLQ9H300 379 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 C21orf62Q9NYP8 219 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 UHRF2Q96PU4 802 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 TENM4Q6N022 2769 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 LINC01548A6NM66 108 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 GNG7O60262 68 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 TOMM40O96008 361 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 FSHBP01225 129 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 TFPI2P48307 235 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
CCDC47-201ENST00000225726 VN1R17PQ8TDU5 208 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
CCDC47-201ENST00000225726 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-201ENST00000225726 TXN2Q99757 166 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 B4DEV8 164 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-201ENST00000225726 LYZP61626 148 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
CCDC47-201ENST00000225726 Q56UQ5 140 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 OR51G1Q8NGK1 321 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 PAXXQ9BUH6 204 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 HNF1AP20823 631 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 NPPCP23582 126 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
CCDC47-201ENST00000225726 C19orf54Q5BKX5 351 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 STXBP6Q8NFX7 210 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 S4R3C0 116 aa11.66□□□□□ -0.54
CCDC47-201ENST00000225726 A0A087WWC5 75 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 F8W735 103 aaPredicted RBP11.65□□□□□ -0.54
CCDC47-201ENST00000225726 OR10J4P0C629 311 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 G3V318 75 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 PPP1R2P9O14990 202 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
CCDC47-201ENST00000225726 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.55
CCDC47-201ENST00000225726 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 A0A1W2PRE2 83 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 ERASQ7Z444 233 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
CCDC47-201ENST00000225726 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
CCDC47-201ENST00000225726 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
CCDC47-201ENST00000225726 SCO2A0A1W2PP80 73 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 PYYP10082 97 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 RHOGP84095 191 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 DOPEY2Q9Y3R5 2298 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 NDUFB4O95168 129 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 IGHG2P01859 326 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 MT-ND4LP03901 98 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 IGF1P05019 195 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 NECAP1Q8NC96 275 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 ZNF502Q8TBZ5 544 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 TMEM208Q9BTX3 173 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 SLC25A39Q9BZJ4 359 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-201ENST00000225726 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 PRRC2AP48634 2157 aaKnown RBP11.63□□□□□ -0.55
CCDC47-201ENST00000225726 POLQO75417 2590 aa11.63□□□□□ -0.55
CCDC47-201ENST00000225726 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 PKIAP61925 76 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 C15orf54Q8N8G6 183 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 Q8WTZ3 238 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 TGOLN2O43493 480 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 OR2C1O95371 312 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 OR2T8A6NH00 312 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
CCDC47-201ENST00000225726 OR5I1Q13606 314 aa11.62□□□□□ -0.55
CCDC47-201ENST00000225726 IL4P05112 153 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 GP9P14770 177 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 IER3P46695 156 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 ADIRFQ15847 76 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 GGTLC3B5MD39 225 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 WFDC11Q8NEX6 87 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 SHANK2-AS3Q9BTD1 123 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 TMEM14CQ9P0S9 112 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 CENPEQ02224 2701 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 H3BRN7 92 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 CTSGP08311 255 aa11.61□□□□□ -0.55
CCDC47-201ENST00000225726 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms