RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
TVP23C-201ENST00000225576 NPFFR1Q9GZQ6 430 aa13.05□□□□□ -0.32
TVP23C-201ENST00000225576 YAE1D1Q9NRH1 226 aa13.05□□□□□ -0.32
TVP23C-201ENST00000225576 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
TVP23C-201ENST00000225576 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 FXYD5Q96DB9 178 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 TMEM14CQ9P0S9 112 aa13.04□□□□□ -0.32
TVP23C-201ENST00000225576 ZNF727A8MUV8 499 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 H3BRN7 92 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 M0R036 132 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 TGOLN2O43493 480 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 PYYP10082 97 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 NPPCP23582 126 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 TPPP2P59282 170 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
TVP23C-201ENST00000225576 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 PARLQ9H300 379 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 PDZD2O15018 2839 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 GP9P14770 177 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 HNF1AP20823 631 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
TVP23C-201ENST00000225576 RHEBQ15382 184 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
TVP23C-201ENST00000225576 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
TVP23C-201ENST00000225576 A0A0G2JLM5 398 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 IGHG4P01861 327 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 PF4V1P10720 104 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 S100A7P31151 101 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 SDF2L1Q9HCN8 221 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 RNF24Q9Y225 148 aa13.02□□□□□ -0.33
TVP23C-201ENST00000225576 OTOGQ6ZRI0 2925 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 SVEP1Q4LDE5 3571 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 C7orf77A4D0Y5 90 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 DNASE2O00115 360 aaPredicted RBP13.01□□□□□ -0.33
TVP23C-201ENST00000225576 NBEAP1P0C6P0 100 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 RAB9AP51151 201 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
TVP23C-201ENST00000225576 TMEM241Q24JQ0 296 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 TMEM95Q3KNT9 176 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 LEMD1Q68G75 181 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 Q8N2B8 174 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
TVP23C-201ENST00000225576 ZNF98A6NK75 572 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 GGTLC3B5MD39 225 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 BMPR1BO00238 502 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 NDUFB4O95168 129 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 SUMO1P63165 101 aaKnown RBP13□□□□□ -0.33
TVP23C-201ENST00000225576 ZNF674Q2M3X9 581 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 BPIFA4PQ86YQ2 179 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 RPS10P5Q9NQ39 176 aa13□□□□□ -0.33
TVP23C-201ENST00000225576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.99□□□□□ -0.33
TVP23C-201ENST00000225576 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 B4DEV8 164 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 HIST1H1EP10412 219 aaKnown RBP12.99□□□□□ -0.33
TVP23C-201ENST00000225576 PSMB8P28062 276 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 GNB4Q9HAV0 340 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
TVP23C-201ENST00000225576 MYCNOSP40205 109 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 SCGB2A2Q13296 93 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 FAM209BQ5JX69 171 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 TCEAL7Q9BRU2 100 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 CCDC168Q8NDH2 2452 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 MRPS12O15235 138 aaKnown RBP12.98□□□□□ -0.33
TVP23C-201ENST00000225576 ARL3P36405 182 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 SLC35B1P78383 322 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 ELOVL1Q9BW60 279 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 ITPR3Q14573 2671 aa12.98□□□□□ -0.33
TVP23C-201ENST00000225576 A0A087WWC5 75 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 PPP5D1E7EU14 171 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 CRYBB3P26998 211 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 OR4F17Q8NGA8 305 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 BLNKQ8WV28 456 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 DUX5Q96PT3 197 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 DERL1Q9BUN8 251 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 SMCO4Q9NRQ5 59 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
TVP23C-201ENST00000225576 IGLC2P0DOY2 106 aa12.96□□□□□ -0.33
TVP23C-201ENST00000225576 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms