RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
GABPB1-201ENST00000220429 IDI2-AS1Q9NZ38 188 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 B9A039 149 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 GRPP07492 148 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 G6PCP35575 357 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 FHL3Q13643 280 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 Q6ZR03 302 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 ZNF355PQ9NSJ1 428 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 CEACAM4O75871 244 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 PRTN3P24158 256 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
GABPB1-201ENST00000220429 UBALD1Q8TB05 177 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 PPDPFQ9H3Y8 114 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 CADP27708 2225 aa11.03□□□□□ -0.64
GABPB1-201ENST00000220429 NPIPB11E5RHQ5 1161 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 CCDC179H3BU77 68 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 MPDU1O75352 247 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 FOXH1O75593 365 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 NCR2O95944 276 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 PSG5Q15238 335 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 C5orf47Q569G3 176 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 MIC13Q5XKP0 118 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 BCL6BQ8N143 479 aaPredicted RBP11.02□□□□□ -0.64
GABPB1-201ENST00000220429 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.64
GABPB1-201ENST00000220429 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.64
GABPB1-201ENST00000220429 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
GABPB1-201ENST00000220429 IGLV2-14P01704 120 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 TCTAP57738 103 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
GABPB1-201ENST00000220429 ADIPOQQ15848 244 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 ASPHD1Q5U4P2 390 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 USF3Q68DE3 2245 aa11.02□□□□□ -0.65
GABPB1-201ENST00000220429 CECR9P0C854 216 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 AMTNQ6UX39 209 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 ATP5L2Q7Z4Y8 100 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 CXorf67Q86X51 503 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-201ENST00000220429 C11orf53Q8IXP5 236 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 Q8TCH9 128 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 DUSP13Q9UII6 198 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 F11RQ9Y624 299 aaKnown RBP11.01□□□□□ -0.65
GABPB1-201ENST00000220429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-201ENST00000220429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-201ENST00000220429 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 CD24P25063 80 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 ZNF138P52744 262 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
GABPB1-201ENST00000220429 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-201ENST00000220429 IGLL5B9A064 214 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 WNT9BO14905 357 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 ATP6V0E2Q8NHE4 81 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 IGF2BP2-AS1Q96M15 143 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 FZR1Q9UM11 496 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 A0A1B0GXF2 115 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 HIGD1CA8MV81 97 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 A8MWL6 223 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 PSPNO60542 156 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 PPIFP30405 207 aaKnown RBP11□□□□□ -0.65
GABPB1-201ENST00000220429 TCF15Q12870 199 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 TRAT1Q6PIZ9 186 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 SEM1Q6ZVN7 128 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 CEP250Q9BV73 2442 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 RP1L1Q8IWN7 2480 aaPredicted RBP11□□□□□ -0.65
GABPB1-201ENST00000220429 IGLV1-44P01699 117 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 PCP2Q8IVA1 136 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 GLMPQ8WWB7 406 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 SNRNP40Q96DI7 357 aaKnown RBP11□□□□□ -0.65
GABPB1-201ENST00000220429 MGST2Q99735 147 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
GABPB1-201ENST00000220429 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
GABPB1-201ENST00000220429 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
GABPB1-201ENST00000220429 KLK10O43240 276 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 THBDP07204 575 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 DIAPH2-AS1Q14236 149 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 EFNB3Q15768 340 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 TREML4Q6UXN2 200 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 ATMQ13315 3056 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 IGHV1-18A0A0C4DH31 117 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 NMUP48645 174 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 HBBP68871 147 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 SPINK9Q5DT21 86 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 TMEM133Q9H2Q1 129 aa10.99□□□□□ -0.65
GABPB1-201ENST00000220429 MAP1BP46821 2468 aaKnown RBP10.98□□□□□ -0.65
GABPB1-201ENST00000220429 C15orf62A8K5M9 175 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
GABPB1-201ENST00000220429 COL8A2P25067 703 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 FAM231DQ6ZW35 169 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 TFF1P04155 84 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 PTH2Q96A98 100 aa10.98□□□□□ -0.65
GABPB1-201ENST00000220429 A4D1N5 150 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 MBD3L4A6NDZ8 208 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms