RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CA7P43166 264 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 RPL27AP46776 148 aaKnown RBP13.8□□□□□ -0.2
USB1-201ENST00000219281 HBBP68871 147 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
USB1-201ENST00000219281 TMEM155Q4W5P6 130 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 C11orf42Q8N5U0 333 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 C22orf15Q8WYQ4 148 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 SMIM12Q96EX1 92 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 TOMM40O96008 361 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 SSX8Q7RTT4 187 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 GTSF1Q8WW33 167 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 URB1-AS1Q96HZ7 61 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 PGLYRP4Q96LB8 373 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 Q9H3A6 140 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 ZFP30Q9Y2G7 519 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 MSRB2Q9Y3D2 182 aa13.8□□□□□ -0.2
USB1-201ENST00000219281 C2orf70A6NJV1 201 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 LTAP01374 205 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 P01737 135 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 TEX45Q8NA69 505 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 C5orf17Q8NAS9 161 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 FMC1Q96HJ9 113 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 PRSS22Q9GZN4 317 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 PLXNB1O43157 2135 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 M0QZ24 198 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 TCRAP04437 139 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 FOXA3P55318 350 aaPredicted RBP13.79□□□□□ -0.2
USB1-201ENST00000219281 SPATA12Q7Z6I5 190 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
USB1-201ENST00000219281 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 SH2D7A6NKC9 451 aaPredicted RBP13.78□□□□□ -0.2
USB1-201ENST00000219281 A8MWL6 223 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 NDUFB8O95169 186 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 LINC00614P0C842 121 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 TSPOP30536 169 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 C8orf46Q8TAG6 207 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
USB1-201ENST00000219281 ZZEF1O43149 2961 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 C19orf71A6NCJ1 209 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 DAZAP1Q96EP5 407 aaKnown RBP13.78□□□□□ -0.2
USB1-201ENST00000219281 DYNLRB1Q9NP97 96 aa13.78□□□□□ -0.2
USB1-201ENST00000219281 HINT1P49773 126 aaPredicted RBP13.77□□□□□ -0.21
USB1-201ENST00000219281 IGF2RP11717 2491 aa13.77□□□□□ -0.21
USB1-201ENST00000219281 SIAH2O43255 324 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 CRYGBP07316 175 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 IGLL1P15814 213 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 NHLH1Q02575 133 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 DMRTA1Q5VZB9 504 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 ZNF492Q9P255 531 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 KAAG1Q9UBP8 84 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 LYZP61626 148 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 CT83Q5H943 113 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 HIGD1AQ9Y241 93 aa13.76□□□□□ -0.21
USB1-201ENST00000219281 TRAV8-1A0A0A6YYK1 113 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 TOX4O94842 621 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 PLP1P60201 277 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 TMEM70Q9BUB7 260 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 POLEQ07864 2286 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 IGHV2-26A0A0B4J1V2 119 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 PSG1P11464 419 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 FAM120AOSQ5T036 256 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 CIARTQ8N365 385 aaPredicted RBP13.75□□□□□ -0.21
USB1-201ENST00000219281 MRPS16Q9Y3D3 137 aaKnown RBP13.75□□□□□ -0.21
USB1-201ENST00000219281 INSIG2Q9Y5U4 225 aa13.75□□□□□ -0.21
USB1-201ENST00000219281 F11RQ9Y624 299 aaKnown RBP13.75□□□□□ -0.21
USB1-201ENST00000219281 PKDREJQ9NTG1 2253 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 TEX22C9J3V5 150 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 RBPMS2Q6ZRY4 209 aaKnown RBP13.74□□□□□ -0.21
USB1-201ENST00000219281 Q71RC1 249 aaPredicted RBP13.74□□□□□ -0.21
USB1-201ENST00000219281 SOX21Q9Y651 276 aaPredicted RBP13.74□□□□□ -0.21
USB1-201ENST00000219281 SPTA1P02549 2419 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 C20orf202A1L168 122 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 E7EQL1 145 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 TCF21O43680 179 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 PPP1R27Q86WC6 154 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 EXOC3-AS1Q8N2X6 119 aa13.74□□□□□ -0.21
USB1-201ENST00000219281 IGHV1-3A0A0C4DH29 117 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 PRNTQ86SH4 94 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 Q86TA4 180 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 SLC25A39Q9BZJ4 359 aaPredicted RBP13.73□□□□□ -0.21
USB1-201ENST00000219281 GFRA4Q9GZZ7 299 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 FBXL15Q9H469 300 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 OTORQ9NRC9 128 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 IGHV1-69-2A0A0G2JMI3 117 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 SHISA9B4DS77 424 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 IGLC1P0CG04 106 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 COL8A1P27658 744 aa13.73□□□□□ -0.21
USB1-201ENST00000219281 CHEK1O14757 476 aa13.72□□□□□ -0.21
USB1-201ENST00000219281 IGLV1-47P01700 117 aa13.72□□□□□ -0.21
USB1-201ENST00000219281 RBP4P02753 201 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms