RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 HAX1O00165 279 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 FCN3O75636 299 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 FAM27E3Q08E93 113 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 NABP1Q96AH0 204 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 UNC13CQ8NB66 2214 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 CSRP1P21291 193 aaKnown RBP8.6□□□□□ -1.03
VCL-201ENST00000211998 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
VCL-201ENST00000211998 RNF144BQ7Z419 303 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
VCL-201ENST00000211998 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
VCL-201ENST00000211998 K7ERJ3 54 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 NTF4P34130 210 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 BSPH1Q075Z2 132 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 LINC00312Q9Y6C7 94 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 CD28P10747 220 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 EXOC3-AS1Q8N2X6 119 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 LOC102723996A0A087X1L8 192 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 MORN2Q502X0 79 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 C8orf46Q8TAG6 207 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 MRAPQ8TCY5 172 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 FAM168AQ92567 244 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 WBP1Q96G27 269 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 CACNA1IQ9P0X4 2223 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 A0A0G2JRQ6 117 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 YPEL1O60688 119 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 C5orf24Q7Z6I8 188 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 AMN1Q8IY45 258 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 RNF125Q96EQ8 232 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 YPEL2Q96QA6 119 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 EFEMP2O95967 443 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 LTBRP36941 435 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 VGLL1Q99990 258 aa8.59□□□□□ -1.03
VCL-201ENST00000211998 PMVKQ15126 192 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 ANKRD36A6QL64 1941 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 PAX1P15863 534 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 IGHV1-2P23083 117 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 RNASE6Q93091 150 aaKnown RBP8.58□□□□□ -1.04
VCL-201ENST00000211998 VWCEQ96DN2 955 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 LINC00479Q96M42 142 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 SLC25A39Q9BZJ4 359 aaPredicted RBP8.58□□□□□ -1.04
VCL-201ENST00000211998 LIME1Q9H400 295 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 ZNF726P1Q15940 193 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 FAM201AQ5SY85 155 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 CD24P25063 80 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 TCF15Q12870 199 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 HAPLN4Q86UW8 402 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 CYYR1Q96J86 154 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 RCHY1Q96PM5 261 aa8.58□□□□□ -1.04
VCL-201ENST00000211998 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 SEC16AO15027 2179 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGLV3-32A0A0A0MS00 114 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGKV1D-33P01593 117 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGKV1-33P01594 117 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 Q6ZRM9 215 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 ZIC4Q8N9L1 334 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGHV3OR16-10A0A075B7F0 116 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 TFF1P04155 84 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 PSG7Q13046 419 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 FAM216BQ8N7L0 139 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 DEFB104AQ8WTQ1 72 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
VCL-201ENST00000211998 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
VCL-201ENST00000211998 VWC2Q2TAL6 325 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 CEND1Q8N111 149 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 TPRP12270 2363 aaKnown RBP8.57□□□□□ -1.04
VCL-201ENST00000211998 BRWD3Q6RI45 1802 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 SLC25A20O43772 301 aa8.57□□□□□ -1.04
VCL-201ENST00000211998 TDRG1Q3Y452 100 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 VOPP1Q96AW1 172 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 ZNF625Q96I27 306 aaPredicted RBP8.56□□□□□ -1.04
VCL-201ENST00000211998 SBF2Q86WG5 1849 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 CD7P09564 240 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 CRYBA4P53673 196 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
VCL-201ENST00000211998 ZNF329Q86UD4 541 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 GFRA4Q9GZZ7 299 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 WDR90Q96KV7 1748 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 TP53BP1Q12888 1972 aaPredicted RBP8.56□□□□□ -1.04
VCL-201ENST00000211998 MPDZO75970 2070 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 PMS2P5A8MQ11 134 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 SH2D1AO60880 128 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 SPANXDQ9BXN6 97 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 V9GYV3 84 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms