RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Pgam5Q8BX10 288 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1446Q8VFX4 308 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Neurl1Q923S6 574 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Glrx2Q923X4 156 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Znf319Q9ERR8 581 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ighv14-4A0A0A6YVR1 117 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Zfp456B2RUK9 458 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Treml4Q3LRV9 263 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 PmelQ60696 626 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Rnf122Q8BP31 155 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1242Q8VGM6 306 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Shank1D3YZU1 2167 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Spam1P48794 512 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm10309Q8C648 119 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Nit1Q8VDK1 323 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1271Q8VG62 305 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Q9CQM1 111 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 ManfQ9CXI5 179 aaKnown RBP13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 HeylQ9DBX7 326 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr906K7N5P3 311 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 B4galt1P15535 399 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Il31Q6EAL8 163 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr358Q7TRY5 330 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 RhovQ8VDU1 236 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Q9DAF8 208 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cldn34c3J3QJW5 233 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Pafah1b2Q61206 229 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Il22ra1Q80XZ4 581 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm10283Q8C3L5 117 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Uqcc3Q8K2T4 89 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Vmn1r202Q8R259 302 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1191-ps1A0A1L1STD5 311 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cd74P04441 279 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ear1P97426 155 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr492Q8VFD1 314 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Lysmd2Q9D7V2 215 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ssmem1Q9D9Y8 244 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Plxnd1Q3UH93 1925 aa13.35□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm28171A0A087WQ19 227 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 1810011H11RikE9PVZ2 95 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ifna4P07351 186 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cln5Q3UMW8 341 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr206Q8VGP9 306 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 TecrQ9CY27 308 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Trbv29A0A0G2LB96 114 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cldn34c2J3QNM1 233 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Nhlh2Q64221 135 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Dnd1Q6VY05 352 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Klk13Q8CGR6 276 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cldn34c1Q8K193 234 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Slc25a10Q9QZD8 287 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Lrrc29A0A1B0GQY9 621 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm5093E9PZB3 174 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Il11P47873 199 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 BmperQ8CJ69 685 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 GgactQ923B0 149 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Carhsp1Q9CR86 148 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm45783A0A1B0GT48 74 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1173Q7TR24 312 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Prodh2Q8VCZ9 456 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr435Q8VFS3 313 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Efemp2Q9WVJ9 443 aa13.34□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Trav5-4A0A075B652 114 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Zfp931A2AHM2 298 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Vmn1r128L7N2B4 307 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tmem52bQ0VBF2 186 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 HaaoQ78JT3 286 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1448Q8VFX1 314 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cds2Q99L43 444 aa13.33□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1118A0A0J9YUE7 307 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Gm4881A0A140LIR9 352 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Gm20877J3QPZ4 227 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Pnliprp2P17892 482 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Zdhhc23Q5Y5T3 425 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Fam234aQ8C0Z1 555 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr1454Q8VFW2 307 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr1458A0A1L1SSD5 307 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr747E9PXH6 313 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr749E9Q438 313 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr609E9Q4X7 319 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Smr2O09133 150 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Mrpl23O35972 146 aaKnown RBP13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Ppp1ccP63087 323 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr822Q8VFU1 312 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr1408Q8VG32 310 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Pnrc2Q9CR73 140 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 NgfrQ9Z0W1 417 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Gm9920D3YVZ2 140 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Fabp6P51162 128 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Olfr495Q8VF12 330 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Tmem208Q9CR96 173 aa13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Ammecr1Q9JHT5 344 aaKnown RBP13.33□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Rnf217D3YYI7 515 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Sod1P08228 154 aaKnown RBP13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Tmem204Q7TQI0 226 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Prg4Q9JM99 1054 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Rnf7Q9WTZ1 113 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 DeddQ9Z1L3 318 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 MpdzQ8VBX6 2055 aa13.32□□□□□ -0.28
Ccdc88b-201ENSMUST00000113440 Onecut1O08755 465 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 82.2 ms