RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 HOXA4Q00056 320 aaPredicted RBP4.8□□□□□ -1.64
CASC19-260ENST00000641828 C5orf64Q2M2E5 130 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 FOXI2Q6ZQN5 318 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 Q6ZSR6 202 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 LCNL1Q6ZST4 164 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 FAM231DQ6ZW35 169 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 MOB1BQ7L9L4 216 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 DRAM1Q8N682 238 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 WDR31Q8NA23 367 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 NHLRC2Q8NBF2 726 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 CT55Q8WUE5 264 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 RNF138Q8WVD3 245 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 NEU4Q8WWR8 484 aaPredicted RBP4.8□□□□□ -1.64
CASC19-260ENST00000641828 H1FXQ92522 213 aaKnown RBP4.8□□□□□ -1.64
CASC19-260ENST00000641828 ZC2HC1AQ96GY0 325 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 CHRNA10Q9GZZ6 450 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 KLRF1Q9NZS2 232 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 HSPB8Q9UJY1 196 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 KCNS2Q9ULS6 477 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 ZNF257Q9Y2Q1 563 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 CABIN1Q9Y6J0 2220 aa4.8□□□□□ -1.64
CASC19-260ENST00000641828 IGHV1-24A0A0C4DH33 117 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 TEX48A0A1B0GUV7 120 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 C15orf62A8K5M9 175 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 NPIPA3F8WFD2 350 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 K7EQM0 130 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 ZIC3O60481 467 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 IGLV2-8P01709 118 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 P04436 131 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 UCNP55089 124 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 CATR1Q13166 79 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 EFNB3Q15768 340 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 RTL8BQ17RB0 113 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 MIC13Q5XKP0 118 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 H2BFWTQ7Z2G1 175 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 TPRX1Q8N7U7 411 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 NUP35Q8NFH5 326 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR2Z1Q8NG97 314 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR4A16Q8NH70 328 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 URB1-AS1Q96HZ7 61 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 MGST2Q99735 147 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 GGTLC1Q9BX51 225 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
CASC19-260ENST00000641828 SH2D2AQ9NP31 389 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 THYN1Q9P016 225 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR1A1Q9P1Q5 309 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 FER1L5A0AVI2 2057 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR11H12B2RN74 326 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 F8W1H4 67 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 SLC25A17O43808 307 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
CASC19-260ENST00000641828 NEURL1O76050 574 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 RUNX3Q13761 415 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 TIMM23BQ5SRD1 257 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 LINC01545Q5VT33 79 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 ZNF788Q6ZQV5 615 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR11H1Q8NG94 326 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR4X2Q8NGF9 303 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR9G4Q8NGQ1 327 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 OR11H2Q8NH07 326 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 C8orf49Q96NF6 230 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 LINC00470Q9BZP3 86 aa4.79□□□□□ -1.64
CASC19-260ENST00000641828 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
CASC19-260ENST00000641828 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 FREM2Q5SZK8 3169 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 FBN2P35556 2912 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 TET2Q6N021 2002 aaPredicted RBP4.78□□□□□ -1.64
CASC19-260ENST00000641828 TRAV24A0A0B4J272 114 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 A0A1W2PRE2 83 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 ZNF32P17041 273 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 CCNOP22674 350 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 UQCRFS1P47985 274 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 PCBD1P61457 104 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 MEF2CQ06413 473 aaPredicted RBP4.78□□□□□ -1.64
CASC19-260ENST00000641828 CEACAM21Q3KPI0 293 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 GDF5OSQ5U4N7 250 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 MRPL21Q7Z2W9 205 aaKnown RBP4.78□□□□□ -1.64
CASC19-260ENST00000641828 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.78□□□□□ -1.64
CASC19-260ENST00000641828 RLN3Q8WXF3 142 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 IGF2BP2-AS1Q96M15 143 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 IDI2-AS1Q9NZ38 188 aa4.78□□□□□ -1.64
CASC19-260ENST00000641828 LSM4Q9Y4Z0 139 aaKnown RBP4.78□□□□□ -1.64
CASC19-260ENST00000641828 FOXH1O75593 365 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 TSPAN13O95857 204 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 FBLP22087 321 aaKnown RBP4.77□□□□□ -1.65
CASC19-260ENST00000641828 ZNF816Q0VGE8 651 aaPredicted RBP4.77□□□□□ -1.65
CASC19-260ENST00000641828 LTC4SQ16873 150 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 C16orf47Q6ZP98 133 aaPredicted RBP4.77□□□□□ -1.65
CASC19-260ENST00000641828 COLCA1Q6ZS62 124 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 SSX8Q7RTT4 187 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 BOD1L2Q8IYS8 172 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 DEFB119Q8N690 84 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 LRRC29Q8WV35 223 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 TAAR6Q96RI8 345 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 VGLL1Q99990 258 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 NDFIP1Q9BT67 221 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 C1QTNF5Q9BXJ0 243 aa4.77□□□□□ -1.65
CASC19-260ENST00000641828 MRPL16Q9NX20 251 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms