RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	TSC22D2	O75157	780 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	APOH	P02749	345 aa	Predicted RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	IL4	P05112	153 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	RBMY1D	P0C7P1	496 aa	Known RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	P2RY1	P47900	373 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	RPL11	P62913	178 aa	Known RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	THAP8	Q8NA92	274 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	C2orf50	Q96LR7	162 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	SEC22C	Q9BRL7	303 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	GGTLC1	Q9BX51	225 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	RABAC1	Q9UI14	185 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	C5orf51	A6NDU8	294 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	UBE2C	O00762	179 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	SSSCA1	O60232	199 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	C16orf54	Q6UWD8	224 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	GSG1L	Q6UXU4	331 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	TMEM144	Q7Z5S9	345 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	RNF125	Q96EQ8	232 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	MS4A6A	Q9H2W1	248 aa		10.62	□□□□□ -0.71
SDHD-209	ENST00000640554	IGKV1D-37	A0A075B6S9	117 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	KIR2DL5B	A0A0G2JN68	375 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	KIR2DL5B	A0A0G2JPC4	375 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	FAM25E	A8MYX2	175 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554		L7N2F9	121 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	SCGB1D2	O95969	90 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	MBP	P02686	304 aa	Predicted RBP	10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	PVALB	P20472	110 aa	Predicted RBP	10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	APOC4	P55056	127 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	PAX9	P55771	341 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	VAMP2	P63027	116 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	IFITM3	Q01628	133 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	ODF3L2	Q3SX64	289 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	C1orf194	Q5T5A4	169 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	TMEM14EP	Q6UXP3	125 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	KIR2DL5A	Q8N109	375 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	LILRB2	Q8N423	598 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	OR10P1	Q8NGE3	313 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	KIR2DL5B	Q8NHK3	375 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	MARVELD1	Q9BSK0	173 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	GGACT	Q9BVM4	153 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	WFDC10A	Q9H1F0	79 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	SEPSECS	Q9HD40	501 aa	Known RBP	10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	SLC45A2	Q9UMX9	530 aa		10.61	□□□□□ -0.71
SDHD-209	ENST00000640554	IGKV3-7	A0A075B6H7	116 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	IGHV3-66	A0A0C4DH42	116 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	INMT-MINDY4	F8WBC2	141 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554		H3BP45	60 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	BUB3	O43684	328 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	DLK1	P80370	383 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	ZNF90	Q03938	601 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	AKR1C1	Q04828	323 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	USF2	Q15853	346 aa	Predicted RBP	10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	NRARP	Q7Z6K4	114 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	S100A7A	Q86SG5	101 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	GBGT1	Q8N5D6	347 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	BPIFC	Q8NFQ6	507 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	NPVF	Q9HCQ7	196 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	FBXL17	Q9UF56	701 aa		10.6	□□□□□ -0.71
SDHD-209	ENST00000640554	C7orf66	A4D0T2	115 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	PMS2P5	A8MQ11	134 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	TFPI2	P48307	235 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	SELENOT	P62341	195 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	ACOT7L	Q6ZUV0	252 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554		Q6ZWC4	215 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	GLMP	Q8WWB7	406 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	CITED4	Q96RK1	184 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	PBDC1	Q9BVG4	233 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	MGAT4C	Q9UBM8	478 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	UBQLN2	Q9UHD9	624 aa		10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	RCL1	Q9Y2P8	373 aa	Known RBP	10.59	□□□□□ -0.71
SDHD-209	ENST00000640554	DNAH9	Q9NYC9	4486 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	IGKV1OR2-108	A0A075B7D4	117 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554		K7EQG2	157 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	CCS	O14618	274 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	DEDD	O75618	318 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	CYCS	P99999	105 aa	Known RBP	10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	WFDC3	Q8IUB2	231 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	STPG3	Q8N7X2	389 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	STXBP6	Q8NFX7	210 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	MAP6D1	Q9H9H5	199 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	TP53TG1	Q9Y2A0	90 aa		10.58	□□□□□ -0.72
SDHD-209	ENST00000640554	C3orf84	H3BNL1	204 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554		K7EPK0	472 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	METTL15P1	P0C7V9	234 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	LYZ	P61626	148 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	IL15RA	Q13261	267 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	SAMD13	Q5VXD3	122 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	SIGLEC15	Q6ZMC9	328 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	NRN1	Q9NPD7	142 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	RNF24	Q9Y225	148 aa		10.57	□□□□□ -0.72
SDHD-209	ENST00000640554	SMCO3	A2RU48	225 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	RLN2	P04090	185 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	SNRPD3	P62318	126 aa	Known RBP	10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	OR2F1	Q13607	317 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	TEPP	Q6URK8	271 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	DCANP1	Q8TF63	244 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	PPP1R14B	Q96C90	147 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	GPR82	Q96P67	336 aa		10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	LSM5	Q9Y4Y9	91 aa	Known RBP	10.56	□□□□□ -0.72
SDHD-209	ENST00000640554	BCAP31	P51572	246 aa		10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms