RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 RGPD2P0DJD1 1756 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 PHIPQ8WWQ0 1821 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 C4orf51C9J302 202 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 SIVA1O15304 175 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 IFI6P09912 130 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 PILRAQ9UKJ1 303 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 EP400Q96L91 3159 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 CFHR1Q03591 330 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 ACP7Q6ZNF0 438 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 JPT2Q9H910 190 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 C21orf62Q9NYP8 219 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 NUP98P52948 1817 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 UBL5Q9BZL1 73 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 MESP2Q0VG99 397 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 TAL2Q16559 108 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 SLC50A1Q9BRV3 221 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 IFNL4K9M1U5 179 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 IGHG4P01861 327 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 TMEM243Q9BU79 118 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 IGKV1D-43A0A0B4J1Z2 117 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 FAM90A9PA6NNJ1 464 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
KCNMA1-259ENST00000639406 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.96
KCNMA1-259ENST00000639406 TTTY12Q9BZ98 90 aa9.02□□□□□ -0.96
KCNMA1-259ENST00000639406 GFRA4Q9GZZ7 299 aa9.02□□□□□ -0.96
KCNMA1-259ENST00000639406 ITGB4P16144 1822 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 PRR32B1ATL7 298 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 G3V4G9 280 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 CSRP1P21291 193 aaKnown RBP9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 PVRIGQ6DKI7 326 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 ZNRF1Q8ND25 227 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 RASL10AQ92737 203 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 PNRC2Q9NPJ4 139 aaKnown RBP9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 IQCF6A8MYZ5 107 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 C5orf67F2Z3F1 127 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 C12orf74Q32Q52 190 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 DUX4L9Q6RFH8 374 aaPredicted RBP9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 SRXN1Q9BYN0 137 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 SPAG17Q6Q759 2223 aa9.02□□□□□ -0.97
KCNMA1-259ENST00000639406 SH2D1AO60880 128 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 SLC25A16P16260 332 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 WDR90Q96KV7 1748 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 IGHV1OR15-9A0A0B4J2B8 117 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 ADARB2-AS1A8MUL3 147 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 LGALS9BQ3B8N2 356 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 LGALS9CQ6DKI2 356 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 PRO1854Q9UHT4 67 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 APOBEC3AP31941 199 aaPredicted RBP9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 BRK1Q8WUW1 75 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 GLMPQ8WWB7 406 aa9.01□□□□□ -0.97
KCNMA1-259ENST00000639406 KNCNA6PVL3 124 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 PRCDQ00LT1 54 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 TCTEX1D4Q5JR98 221 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 MRPS18CQ9Y3D5 142 aaKnown RBP9□□□□□ -0.97
KCNMA1-259ENST00000639406 HAMPP81172 84 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 TMEM14EPQ6UXP3 125 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 TMEM190Q8WZ59 177 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 AKAP11Q9UKA4 1901 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 ZNF638Q14966 1978 aaKnown RBP9□□□□□ -0.97
KCNMA1-259ENST00000639406 EXOC3-AS1Q8N2X6 119 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 LINC01587Q99440 93 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 SPXQ9BT56 116 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 CEP350Q5VT06 3117 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 IL18BPO95998 194 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
KCNMA1-259ENST00000639406 NMSQ5H8A3 153 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 DCTN5Q9BTE1 182 aa9□□□□□ -0.97
KCNMA1-259ENST00000639406 TIAF1O95411 115 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 ZNF474Q6S9Z5 364 aaPredicted RBP8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 LINC00114Q6XXX2 140 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 CTHRC1Q96CG8 243 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 MIA3Q5JRA6 1907 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 VCYO14598 125 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 RS1O15537 224 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 CLEC19AQ6UXS0 136 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 ZNF329Q86UD4 541 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 IGKV1-9A0A0C4DH69 117 aa8.99□□□□□ -0.97
KCNMA1-259ENST00000639406 A0A1W2PR77 199 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms