RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 IGLV2-23P01705 113 aa13.27□□□□□ -0.29
CLN5-208ENST00000636183 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.29
CLN5-208ENST00000636183 SPTBN2O15020 2390 aa13.27□□□□□ -0.29
CLN5-208ENST00000636183 ZNF48Q96MX3 618 aaPredicted RBP13.27□□□□□ -0.29
CLN5-208ENST00000636183 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
CLN5-208ENST00000636183 CD5P06127 495 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 MST1P26927 711 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 CD300CQ08708 224 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
CLN5-208ENST00000636183 Q9HAA7 133 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 IL36BQ9NZH7 164 aa13.26□□□□□ -0.29
CLN5-208ENST00000636183 RPUSD1Q9UJJ7 312 aaKnown RBP13.26□□□□□ -0.29
CLN5-208ENST00000636183 ZNF250P15622 560 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 PAX9P55771 341 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 CD55P08174 381 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 UBE2BP63146 152 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 LYPD2Q6UXB3 125 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
CLN5-208ENST00000636183 TM2D1Q9BX74 207 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 OVOL3O00110 214 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 POLEQ07864 2286 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 NDUFS8O00217 210 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 TCF15Q12870 199 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 Q6AWC8 147 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
CLN5-208ENST00000636183 IGLV3-12A0A075B6K2 115 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 M0R1W7 72 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 PMS2P5A8MQ11 134 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
CLN5-208ENST00000636183 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 F8VVB4 439 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 F8VWA3 439 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 WISP3O95389 354 aaPredicted RBP13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE1Q13065 139 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE4Q13068 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE5Q13069 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
CLN5-208ENST00000636183 FAM19A2Q8N3H0 131 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 A0A1B0GWB2 263 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE12BA1L429 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE7O76087 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE12FP0CL80 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE12GP0CL81 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 GAGE12IP0CL82 117 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 C14orf144Q96I85 54 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
CLN5-208ENST00000636183 LAMB2P55268 1798 aa13.24□□□□□ -0.29
CLN5-208ENST00000636183 PI4KAP42356 2102 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 ALPK2Q86TB3 2170 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 PAQR4Q8N4S7 273 aaPredicted RBP13.23□□□□□ -0.29
CLN5-208ENST00000636183 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
CLN5-208ENST00000636183 TCF20Q9UGU0 1960 aaKnown RBP13.23□□□□□ -0.29
CLN5-208ENST00000636183 E7EQL1 145 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 BUB1B-PAK6H3BSN5 160 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 C21orf62-AS1Q17RA5 79 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
CLN5-208ENST00000636183 PSMG3Q9BT73 122 aaPredicted RBP13.23□□□□□ -0.29
CLN5-208ENST00000636183 PLNP26678 52 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
CLN5-208ENST00000636183 DANCRP0C864 163 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 MARF1Q9Y4F3 1742 aaKnown RBP13.22□□□□□ -0.29
CLN5-208ENST00000636183 MYO7BQ6PIF6 2116 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 A0A087WWL8 130 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 EXOC3-AS1Q8N2X6 119 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
CLN5-208ENST00000636183 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 HIST1H4AP62805 103 aaKnown RBP13.22□□□□□ -0.29
CLN5-208ENST00000636183 RMI2Q96E14 147 aa13.22□□□□□ -0.29
CLN5-208ENST00000636183 PRR31Q5SQ13 230 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 IGKV1D-13A0A0B4J2D9 117 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 A0A1B0GW15 77 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 IGKV1-13P0DP09 117 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 MST1LQ2TV78 715 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 ZNF660Q6AZW8 331 aaPredicted RBP13.21□□□□□ -0.29
CLN5-208ENST00000636183 FAM169BQ8N8A8 192 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 PLXNA1Q9UIW2 1896 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 IZUMO1RA6ND01 250 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 CLPSL2Q6UWE3 100 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 REG4Q9BYZ8 158 aa13.21□□□□□ -0.29
CLN5-208ENST00000636183 NDUFS5O43920 106 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms