RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GSX1Q9H4S2 264 aaPredicted RBP15.63■□□□□ 0.09
PCDHB11-202ENST00000624887 TOX4O94842 621 aa15.62■□□□□ 0.09
PCDHB11-202ENST00000624887 TBL2Q9Y4P3 447 aaKnown RBP15.62■□□□□ 0.09
PCDHB11-202ENST00000624887 K7EIM0 57 aa15.62■□□□□ 0.09
PCDHB11-202ENST00000624887 ZNF562Q6V9R5 426 aa15.62■□□□□ 0.09
PCDHB11-202ENST00000624887 OR10D4PQ8NGN7 298 aa15.62■□□□□ 0.09
PCDHB11-202ENST00000624887 UBE2E1P51965 193 aa15.61■□□□□ 0.09
PCDHB11-202ENST00000624887 TIGITQ495A1 244 aa15.61■□□□□ 0.09
PCDHB11-202ENST00000624887 ZNF329Q86UD4 541 aa15.61■□□□□ 0.09
PCDHB11-202ENST00000624887 FAM103A1Q9BTL3 118 aaKnown RBP15.61■□□□□ 0.09
PCDHB11-202ENST00000624887 PSG1P11464 419 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 PKIAP61925 76 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 ACTL10Q5JWF8 245 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 REC114Q7Z4M0 266 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 OR5R1Q8NH85 324 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 C14orf144Q96I85 54 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 IGF2BP2-AS1Q96M15 143 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 TBX15Q96SF7 602 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 WNK2Q9Y3S1 2297 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 CX3CL1P78423 397 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 RASL11BQ9BPW5 248 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 IL36BQ9NZH7 164 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 CDC42EP3Q9UKI2 254 aa15.6■□□□□ 0.09
PCDHB11-202ENST00000624887 A0A0U1RQK1 487 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 ZNF320A2RRD8 509 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 NPIPB5A8MRT5 1133 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 GOSR1O95249 250 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 IGKV1-17P01599 117 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 IGHV4-39P01824 125 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 MYCNOSP40205 109 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 TAS2R60P59551 318 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 ERVFC1-1P60608 527 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 OR5I1Q13606 314 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 CDPF1Q6NVV7 123 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 ARPC1AQ92747 370 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 PITPNC1Q9UKF7 332 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 ABCA1O95477 2261 aa15.59■□□□□ 0.09
PCDHB11-202ENST00000624887 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 GCGP01275 180 aa15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 IGLV2-8P01709 118 aa15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 RNF224P0DH78 156 aa15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 GPR61Q9BZJ8 451 aa15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 HIGD1AQ9Y241 93 aa15.58■□□□□ 0.09
PCDHB11-202ENST00000624887 TRAV9-1A0A075B6T8 112 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 SLC17A3O00476 420 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 GP9P14770 177 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 TMEM11P17152 192 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 PDLIM4P50479 330 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 ASPHD1Q5U4P2 390 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 GFI1BQ5VTD9 330 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 AJUBAQ96IF1 538 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 V9GYV3 84 aa15.58■□□□□ 0.08
PCDHB11-202ENST00000624887 PEX7O00628 323 aa15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 RPL15P61313 204 aaKnown RBP15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 LYZP61626 148 aa15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 NDPQ00604 133 aa15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 LBHQ53QV2 105 aaPredicted RBP15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 RBM14Q96PK6 669 aaKnown RBP15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 OSTCQ9NRP0 149 aa15.57■□□□□ 0.08
PCDHB11-202ENST00000624887 NBEAP1P0C6P0 100 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 RD3LP0DJH9 198 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 FOSL1P15407 271 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 CNN1P51911 297 aaKnown RBP15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 TTC9CQ8N5M4 171 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 MED13LQ71F56 2210 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 AKAP6Q13023 2319 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 IGLV11-55A0A075B6I3 123 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 TSTD3H0UI37 97 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 ISLRO14498 428 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 FAM106CPP0CH98 169 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 RANP62826 216 aaKnown RBP15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 LINC00479Q96M42 142 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 FANCD2OSQ96PS1 177 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 LPAR2Q9HBW0 351 aa15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 MRPL27Q9P0M9 148 aaKnown RBP15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 POLR3KQ9Y2Y1 108 aaPredicted RBP15.56■□□□□ 0.08
PCDHB11-202ENST00000624887 SNRPCP09234 159 aaKnown RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 DDTP30046 118 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 KLF17Q5JT82 389 aaPredicted RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 BLNKQ8WV28 456 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 SLC25A39Q9BZJ4 359 aaPredicted RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 ASH1LQ9NR48 2969 aaKnown RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 SAA4P35542 130 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 COA6Q5JTJ3 125 aaKnown RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 LEMD1Q68G75 181 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 RNASE7Q9H1E1 156 aaKnown RBP15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 C1RLQ9NZP8 487 aa15.55■□□□□ 0.08
PCDHB11-202ENST00000624887 Q8N9W7 124 aa15.54■□□□□ 0.08
PCDHB11-202ENST00000624887 TMEM14CQ9P0S9 112 aa15.54■□□□□ 0.08
PCDHB11-202ENST00000624887 EPDR1Q9UM22 224 aa15.54■□□□□ 0.08
PCDHB11-202ENST00000624887 TRAPPC1Q9Y5R8 145 aa15.54■□□□□ 0.08
PCDHB11-202ENST00000624887 PGPA6NDG6 321 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 BRS3P32247 399 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 PDZD11Q5EBL8 140 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 TMEM183AQ8IXX5 376 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 ZNF48Q96MX3 618 aaPredicted RBP15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 HIST1H2BLQ99880 126 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 IGHV7-81A0A0B4J1V7 117 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 TOMM40O96008 361 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms