RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 C8orf88P0DMB2 117 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 UCP1P25874 307 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
CUL3-216ENST00000617432 PCP4P48539 62 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 TMBIM6P55061 237 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 SUPT4H1P63272 117 aaKnown RBP3.37□□□□□ -1.87
CUL3-216ENST00000617432 TATDN3Q17R31 274 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 TMEM268Q5VZI3 342 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 APRG1Q8IVJ8 170 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 SELENOHQ8IZQ5 122 aaKnown RBP3.37□□□□□ -1.87
CUL3-216ENST00000617432 GBGT1Q8N5D6 347 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 OR5B3Q8NH48 314 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 MCFD2Q8NI22 146 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 VN1R17PQ8TDU5 208 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 GLYATL2Q8WU03 294 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 RAB2BQ8WUD1 216 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 CXorf58Q96LI9 332 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 RNF2Q99496 336 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 NXF2Q9GZY0 626 aaKnown RBP3.37□□□□□ -1.87
CUL3-216ENST00000617432 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 NAA60Q9H7X0 242 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 TUBA4BQ9H853 241 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 MAP6D1Q9H9H5 199 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 COPZ2Q9P299 210 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 CACNG5Q9UF02 275 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 RYR2Q92736 4967 aa3.37□□□□□ -1.87
CUL3-216ENST00000617432 TEX13DA0A0J9YY54 714 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CRYM-AS1A6NIL9 109 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CHEK1O14757 476 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CTDSPLO15194 276 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 NUPL2O15504 423 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 GSTZ1O43708 216 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 SCGB2A1O75556 95 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 YIF1AO95070 293 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 IFNA17P01571 189 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 S100A6P06703 90 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 AKAIN1P0CW23 69 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 RPL35AP18077 110 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 FCGR2BP31994 310 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 RPL5P46777 297 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 HOXA1P49639 335 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 CAMPP49913 170 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 HSPE1P61604 102 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 TMEM187Q14656 261 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TIGITQ495A1 244 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 AARDQ4LEZ3 155 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 PVRIGQ6DKI7 326 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 LPCAT3Q6P1A2 487 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TOMM20LQ6UXN7 152 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 LINC00469Q8N7U9 141 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 SLC35G3Q8N808 338 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 ZNF114Q8NC26 417 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 OR52B4Q8NGK2 314 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 OR1L6Q8NGR2 347 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 OR2K2Q8NGT1 345 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 OR1P1Q8NH06 330 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TERB2Q8NHR7 220 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 RNASE11Q8TAA1 199 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 BORCS5Q969J3 196 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 BSCL2Q96G97 398 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 TMEM56Q96MV1 263 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TMEM222Q9H0R3 208 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 MCUBQ9NWR8 336 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 SLC2A8Q9NY64 477 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 GPR132Q9UNW8 380 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 LYSTQ99698 3801 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 IGHV7-4-1A0A0J9YVY3 117 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 FABP12A6NFH5 140 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CCDC160A6NGH7 325 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 DISC1C4P0D8 188 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 NDUFA4O00483 81 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 GNG7O60262 68 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 PAGE4O60829 102 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CDS2O95674 445 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 AKR1C4P17516 323 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TBPP20226 339 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CCR6P51684 374 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 TNFRSF9Q07011 255 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 DEFB135Q30KP9 77 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 BSXQ3C1V8 233 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 ANKRD55Q3KP44 614 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 PYDC2Q56P42 97 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 FAM90A2PQ658T7 463 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 LEMD1Q68G75 181 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 THOC7Q6I9Y2 204 aaKnown RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 LYZL2Q7Z4W2 148 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 TMED4Q7Z7H5 227 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CADM3Q8N126 398 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 CCDC71LQ8N9Z2 235 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 SLC24A4Q8NFF2 622 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 ZFAND1Q8TCF1 268 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 ZNF486Q96H40 463 aaPredicted RBP3.36□□□□□ -1.87
CUL3-216ENST00000617432 TSC22D3Q99576 134 aa3.36□□□□□ -1.87
CUL3-216ENST00000617432 SDHCQ99643 169 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms