RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GASTP01350 101 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 CTSDP07339 412 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 C17orf77Q96MU5 243 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SMIM14Q96QK8 99 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 TMEM272A0A1B0GTI8 110 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 IFITM2Q01629 132 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 COX20Q5RI15 118 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 CSTL1Q9H114 145 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 ST20Q9HBF5 79 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 NME4O00746 187 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 CBLN1P23435 193 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SUCLG1P53597 346 aaKnown RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 PSG3Q16557 428 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 C2orf83Q53S99 150 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 PET117Q6UWS5 81 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 BHLHA9Q7RTU4 235 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 VPS25Q9BRG1 176 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 MED12LQ86YW9 2145 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 ICE1Q9Y2F5 2266 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 TRDV1A0A1B0GX56 115 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SMIM30A4D0T7 59 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 H3BP45 60 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 FCN3O75636 299 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 ZNF324BQ6AW86 544 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 HEPN1Q6WQI6 88 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 C10orf111Q8N326 155 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 THAP7Q9BT49 309 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 FAM90A9PA6NNJ1 464 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 OVOL3O00110 214 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 DUTP33316 252 aaKnown RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 CAMPP49913 170 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 LBHQ53QV2 105 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 C6orf201Q7Z4U5 140 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 TMEM30AQ9NV96 361 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 A0A1W2PPQ1 181 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 MEX3AA1L020 520 aaKnown RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 PRKNO60260 465 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 OR10G4Q8NGN3 311 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 OR10G7Q8NGN6 311 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 OR1P1Q8NH06 330 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SFRP2Q96HF1 295 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 DNAJC4Q9NNZ3 241 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SIX6O95475 246 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 IGKV1D-16P01601 117 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 IGKV1-16P04430 117 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 GRNP28799 593 aaKnown RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 EGR4Q05215 589 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 ZNF493Q6ZR52 646 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 A0A1B0GWB2 263 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 M0R381 172 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 UBE2D2P62837 147 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 PSG2P11465 335 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 RCC1P18754 421 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 KIR3DS1Q14943 382 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 C8orf82Q6P1X6 216 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 SAA2-SAA4A0A096LPE2 208 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 SAA2P0DJI9 122 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 BATFQ16520 125 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 DPPA3Q6W0C5 159 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 LINC00305Q7Z4B0 112 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 C20orf141Q9NUB4 165 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 MRPL36Q9P0J6 103 aaKnown RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 MDKP21741 143 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 RASL10AQ92737 203 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 VWCEQ96DN2 955 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 KLF12Q9Y4X4 402 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 KRTDAPP60985 99 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 ZNF318Q5VUA4 2279 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 DNAJC13O75165 2243 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 IGLV5-52A0A0A0MRZ9 124 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 ANGP03950 147 aaKnown RBP2.71□□□□□ -1.97
LPP-220ENST00000617246 LINC00518Q8N0U6 118 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 PLA2G2EQ9NZK7 142 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 ANAPC10Q9UM13 185 aa2.71□□□□□ -1.97
LPP-220ENST00000617246 FHL1Q13642 323 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 LINC00336Q6ZUF6 198 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 ELF5Q9UKW6 265 aaPredicted RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 LYPD4Q6UWN0 246 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 CYP2G1PQ6ZSU1 146 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 AQP3Q92482 292 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 ATP6V0BQ99437 205 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 VAMP8Q9BV40 100 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RNF151Q2KHN1 245 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 CD28P10747 220 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 TBX15Q96SF7 602 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 GPX7Q96SL4 187 aaPredicted RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 SMIM7Q9BQ49 75 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RHPN1-AS1Q9BWJ2 59 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 RCC2Q9P258 522 aaKnown RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 LINC00527Q9UJ94 153 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 TRAV1-2A0A0B4J238 106 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 A0A1W2PQL4 384 aaPredicted RBP2.71□□□□□ -1.98
LPP-220ENST00000617246 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 PYGO2Q9BRQ0 406 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 IGHV1-24A0A0C4DH33 117 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 A0A1B0GW15 77 aa2.71□□□□□ -1.98
LPP-220ENST00000617246 FABP5P3A8MUU1 101 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms