RNA–Protein interactions for RNA: ENST00000616559.4

PTPRQ-209, Transcript of protein tyrosine phosphatase, receptor type Q, humanhuman

TSL 5 BASIC

Gene PTPRQ, Length 8,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQ-209ENST00000616559 ZNF524Q96C55 264 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 INSM2Q96T92 566 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 NOTCH1P46531 2555 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 EFCAB6Q5THR3 1501 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 WDFY4Q6ZS81 3184 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 IGHV4OR15-8A0A075B7B6 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 A0A087WW49 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 NPIPB5A8MRT5 1133 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 IQCF6A8MYZ5 107 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FAM229AH3BQW9 127 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 LINC01565O15544 149 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 ZNF354AO60765 605 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 IGLV3-27P01718 113 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 MT-ATP8P03928 68 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 CALCBP10092 127 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 LIM2P55344 173 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 RPS24P62847 133 aaKnown RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 METRNLQ641Q3 311 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FGF14Q92915 247 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 SHISA4Q96DD7 197 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 SIGLEC12Q96PQ1 595 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 SCRT2Q9NQ03 307 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 WSB1Q9Y6I7 421 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 SHANK3Q9BYB0 1731 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 XIRP2A4UGR9 3374 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 NRXN3Q9Y4C0 1643 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 IGHV3-15A0A0B4J1V0 119 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 NPIPB13A6NJU9 1138 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 UBE2CO00762 179 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 ACYP1P07311 99 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PTHLHP12272 177 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PSMG4Q5JS54 123 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 C1QL3Q5VWW1 255 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FBXW9Q5XUX1 488 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 CD300LDQ6UXZ3 194 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 CBLN2Q8IUK8 224 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 STPG2Q8N412 459 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 OR52N1Q8NH53 320 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 MVB12AQ96EY5 273 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 TIMM21Q9BVV7 248 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FGFBP2Q9BYJ0 223 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 TSSC4Q9Y5U2 329 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PRR36Q9H6K5 1346 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 SIPA1L3O60292 1781 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 VPS13AQ96RL7 3174 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE12JA6NER3 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FNDC10F2Z333 226 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 BCL2P10415 239 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FAM3BP58499 235 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 TRA2BP62995 288 aaKnown RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 HOXC5Q00444 222 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PSG4Q00888 419 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PRCDQ00LT1 54 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 COL10A1Q03692 680 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE1Q13065 139 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE4Q13068 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE5Q13069 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE6Q13070 117 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 LAGE3Q14657 143 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 FAM74A3Q4VXF1 159 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 RFESDQ8TAC1 157 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 PLA2G12BQ9BX93 195 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 VAX2Q9UIW0 290 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 ZNF257Q9Y2Q1 563 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 V9GYH0 126 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 ERVK-7P63135 1459 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 HECTD1Q9ULT8 2610 aa1.76□□□□□ -2.13
PTPRQ-209ENST00000616559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 IGKV1D-8A0A087WSZ0 117 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 PRSS29PA6NIE9 313 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 FOXI3A8MTJ6 420 aaPredicted RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 B4DSR2 109 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 TRDCB7Z8K6 153 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 UPK3AO75631 287 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 NDUFA3O95167 84 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 TIAF1O95411 115 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 RPS26P62854 115 aaKnown RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 EWSR1Q01844 656 aaKnown RBP eCLIP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 RGNQ15493 299 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 INO80CQ6PI98 192 aaPredicted RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 SHISA2Q6UWI4 295 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 MAVSQ7Z434 540 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 CDCA4Q9BXL8 241 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 POLR3KQ9Y2Y1 108 aaPredicted RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 SETD2Q9BYW2 2564 aaPredicted RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 BPTFQ12830 3046 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 IGKV1-6A0A0C4DH72 117 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 GAGE12BA1L429 117 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 SMIM9A6NGZ8 99 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 IGHA1P01876 353 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 RPL27AP46776 148 aaKnown RBP1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 SPINT3P49223 89 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 HILS1P60008 231 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 HAMPP81172 84 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 WDR82Q6UXN9 313 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 LINC00311Q8N616 119 aa1.75□□□□□ -2.13
PTPRQ-209ENST00000616559 TMEM255BQ8WV15 326 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms