RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CCR2P41597 374 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 RPL27AP46776 148 aaKnown RBP1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 TAS2R20P59543 309 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 DNAJB13P59910 316 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 HIST1H1AQ02539 215 aaPredicted RBP1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 MSMO1Q15800 293 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 RTL8BQ17RB0 113 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 RRN3P1Q2M238 152 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 FAM229BQ4G0N7 80 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 RPP25LQ8N5L8 163 aaKnown RBP1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 TSTD1Q8NFU3 115 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 OR51T1Q8NGJ9 327 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 OR4C16Q8NGL9 310 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 FNDC9Q8TBE3 224 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 WFDC5Q8TCV5 224 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 UPK3BQ9BT76 320 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 RTL8AQ9BWD3 113 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 SMIM3Q9BZL3 60 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 OR2H1Q9GZK4 316 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 OR8D2Q9GZM6 311 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 C16orf95Q9H693 158 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 LAMTOR2Q9Y2Q5 125 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 U3KQ87 197 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 SHROOM2Q13796 1616 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 EIF4G3O43432 1585 aaKnown RBP1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 DIP2BQ9P265 1576 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 GREB1Q4ZG55 1949 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 OBSL1O75147 1896 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 FER1L6Q2WGJ9 1857 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 CDK5RAP2Q96SN8 1893 aa1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 NYNRINQ9P2P1 1898 aaKnown RBP1.5□□□□□ -2.17
SCAMP1-205ENST00000614488 BCL9O00512 1426 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 TARBP1Q13395 1621 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 BORCS7-ASMTA0A0B4J1R7 106 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 TRAV38-1A0A0B4J264 116 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 A0A1B0GW54 56 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 C9JAW5 83 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 GABARAPH6UMI1 98 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 M0R378 163 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 TXNDC9O14530 226 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 PGLYRP1O75594 196 aaPredicted RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SULT1C4O75897 302 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 LYZL6O75951 148 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 IGHV1-69P01742 117 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 APOC1P02654 83 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 DBIP07108 87 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 MPC1LP0DKB6 136 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 S100A4P26447 101 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 RBM11P57052 281 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 RPL18Q07020 188 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 NDUFA5Q16718 116 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 LINC01554Q52M75 96 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 ZNF705AQ6ZN79 300 aaPredicted RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SDIM1Q6ZPB5 146 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 OR8I2Q8N0Y5 310 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 OR8D4Q8NGM9 314 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 PPTC7Q8NI37 304 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 CANT1Q8WVQ1 401 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 ISOC1Q96CN7 298 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SLAMF6Q96DU3 332 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SLC25A21Q9BQT8 299 aaPredicted RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 YIPF3Q9GZM5 350 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 OTORQ9NRC9 128 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SLC39A9Q9NUM3 307 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 SPANXCQ9NY87 97 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 LAMTOR3Q9UHA4 124 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 HIGD1AQ9Y241 93 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 RNF11Q9Y3C5 154 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 GLI2P10070 1586 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 URB2Q14146 1524 aaKnown RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 GAPVD1Q14C86 1478 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 MAGI1Q96QZ7 1491 aaPredicted RBP1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 FANCD2Q9BXW9 1451 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 TRPM6Q9BX84 2022 aa1.49□□□□□ -2.17
SCAMP1-205ENST00000614488 PPRC1Q5VV67 1664 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 ADGBQ8N7X0 1667 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 IGHV3-73A0A0B4J1V6 119 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 IGKV1-9A0A0C4DH69 117 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 A0A0D9SEW6 157 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 TLCD2A6NGC4 264 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 FABP5P3A8MUU1 101 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 F8W036 122 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 H3BT86 120 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 TMEM256-PLSCR3K7ERE1 68 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 DLEU1O43261 78 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 NDUFB2O95178 105 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 OR2H2O95918 312 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 MT-ND4LP03901 98 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 CXCL1P09341 107 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 CCL5P13501 91 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 ZNF22P17026 224 aaPredicted RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 PSMB8P28062 276 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 SRP14P37108 136 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 TMBIM6P55061 237 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 FXYD7P58549 80 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 EIF5AP63241 154 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 RHOGP84095 191 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 PSG9Q00887 426 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 EIF3IQ13347 325 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 NEDD8Q15843 81 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms