RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ZNF808Q8N4W9 903 aaPredicted RBP12.97□□□□□ -0.33
RTN1-209ENST00000611068 FAM216BQ8N7L0 139 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 BLNKQ8WV28 456 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
RTN1-209ENST00000611068 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 TNFRSF19Q9NS68 423 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 RNF7Q9UBF6 113 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 EPG5Q9HCE0 2579 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 RRHO14718 337 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 HBZP02008 142 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 SLC25A6P12236 298 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 GATA3P23771 443 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 ASPHD1Q5U4P2 390 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 LEAP2Q969E1 77 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
RTN1-209ENST00000611068 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 YTHDF2Q9Y5A9 579 aaKnown RBP12.97□□□□□ -0.33
RTN1-209ENST00000611068 TUSC2O75896 110 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 AMY1AP04745 511 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 Q6ZS49 121 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 EAF1Q96JC9 268 aaPredicted RBP12.96□□□□□ -0.33
RTN1-209ENST00000611068 TMEM147Q9BVK8 224 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 HILPDAQ9Y5L2 63 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 LY6HO94772 140 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 LHBP01229 141 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 PRB1P04280 392 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
RTN1-209ENST00000611068 USF1P22415 310 aaPredicted RBP12.96□□□□□ -0.33
RTN1-209ENST00000611068 HTR1DP28221 377 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 SLC35E4Q6ICL7 350 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 OR2D2Q9H210 308 aa12.96□□□□□ -0.33
RTN1-209ENST00000611068 ARFGEF3Q5TH69 2177 aa12.96□□□□□ -0.34
RTN1-209ENST00000611068 HLA-DQA1P01909 254 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 APOA2P02652 100 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 RPL8P62917 257 aaKnown RBP12.95□□□□□ -0.34
RTN1-209ENST00000611068 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
RTN1-209ENST00000611068 TMEM177Q53S58 311 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 FAM120AOSQ5T036 256 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 PET117Q6UWS5 81 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 TRBV6-6A0A0A6YYG2 114 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 A0A0G2JLM5 398 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 GALMQ96C23 342 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
RTN1-209ENST00000611068 MBNL3Q9NUK0 354 aaKnown RBP12.95□□□□□ -0.34
RTN1-209ENST00000611068 PGPEP1Q9NXJ5 209 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 SPCS1Q9Y6A9 102 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 USF3Q68DE3 2245 aa12.95□□□□□ -0.34
RTN1-209ENST00000611068 RAI1Q7Z5J4 1906 aaPredicted RBP12.95□□□□□ -0.34
RTN1-209ENST00000611068 TMEM97Q5BJF2 176 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
RTN1-209ENST00000611068 SS18L2Q9UHA2 77 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
RTN1-209ENST00000611068 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 FBLL1A6NHQ2 334 aaKnown RBP12.94□□□□□ -0.34
RTN1-209ENST00000611068 CA1P00915 261 aaPredicted RBP12.94□□□□□ -0.34
RTN1-209ENST00000611068 HLA-DRB1P01911 266 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 LSM10Q969L4 123 aaKnown RBP12.94□□□□□ -0.34
RTN1-209ENST00000611068 C19orf24Q9BVV8 132 aa12.94□□□□□ -0.34
RTN1-209ENST00000611068 SYS1-DBNDD2H3BUS1 97 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 SLC25A17O43808 307 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 SPATA31B1PQ5VZV4 182 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 Q8N7P7 452 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 PMCHL2Q9BQD1 86 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 H3BRM9 83 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 ADH4P08319 380 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
RTN1-209ENST00000611068 TCTEX1D4Q5JR98 221 aa12.93□□□□□ -0.34
RTN1-209ENST00000611068 OOEPA6NGQ2 149 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 IGFBP2P18065 325 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 SEC11AP67812 179 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 H0Y8G0 127 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
RTN1-209ENST00000611068 GATA4P43694 442 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 GDF5OSQ5U4N7 250 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 CRXO43186 299 aaPredicted RBP12.92□□□□□ -0.34
RTN1-209ENST00000611068 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 MOB1BQ7L9L4 216 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 VSTM2AQ8TAG5 236 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
RTN1-209ENST00000611068 MYO18BQ8IUG5 2567 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 VSTM5A8MXK1 200 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 TNFRSF1AP19438 455 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 CFHR2P36980 270 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 RAB31Q13636 194 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms