RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BTF3L4Q96K17 158 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 RASL11BQ9BPW5 248 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 SPTAN1Q13813 2472 aaKnown RBP10.8□□□□□ -0.68
NEK3-205ENST00000610828 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 IGHV2-70DA0A0C4DH43 119 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 LYZP61626 148 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 LEMD1Q68G75 181 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 ZNF329Q86UD4 541 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 PITPNC1Q9UKF7 332 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 MGST1P10620 155 aaKnown RBP10.79□□□□□ -0.68
NEK3-205ENST00000610828 KLF17Q5JT82 389 aaPredicted RBP10.79□□□□□ -0.68
NEK3-205ENST00000610828 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 K7EIM0 57 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 CX3CL1P78423 397 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 PYY3Q5JQD4 70 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 NHLRC2Q8NBF2 726 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 OR10D4PQ8NGN7 298 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 IGF2BP2-AS1Q96M15 143 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 RBM14Q96PK6 669 aaKnown RBP10.79□□□□□ -0.68
NEK3-205ENST00000610828 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
NEK3-205ENST00000610828 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
NEK3-205ENST00000610828 LINC00587B1AMM8 73 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 TMEM11P17152 192 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 CNN1P51911 297 aaKnown RBP10.78□□□□□ -0.68
NEK3-205ENST00000610828 PLP1P60201 277 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 LMO4P61968 165 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 CDC42EP3Q9UKI2 254 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 V9GYV3 84 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 ZFHX3Q15911 3703 aa10.78□□□□□ -0.68
NEK3-205ENST00000610828 XKRY2A2RUG3 117 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 TMEM8BA6NDV4 472 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 PEX7O00628 323 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 IGLV2-8P01709 118 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 NBEAP1P0C6P0 100 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 FABP4P15090 132 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 RPEL1Q2QD12 228 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 OR1L6Q8NGR2 347 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.68
NEK3-205ENST00000610828 TRAV34A0A0B4J273 112 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 OVOL3O00110 214 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 IGKV1-17P01599 117 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 RD3LP0DJH9 198 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 RPL15P61313 204 aaKnown RBP10.77□□□□□ -0.69
NEK3-205ENST00000610828 GNG5P63218 68 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 NDPQ00604 133 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 TBX15Q96SF7 602 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 S4R3C0 116 aa10.77□□□□□ -0.69
NEK3-205ENST00000610828 H3BTX0 84 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 GCGP01275 180 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 IGHV4-39P01824 125 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 GP9P14770 177 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 UBE2E1P51965 193 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 TAS2R60P59551 318 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 IBA57Q5T440 356 aaKnown RBP10.76□□□□□ -0.69
NEK3-205ENST00000610828 Q8N6K4 173 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 PGPA6NDG6 321 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
NEK3-205ENST00000610828 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 CDPF1Q6NVV7 123 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 SLC25A39Q9BZJ4 359 aaPredicted RBP10.76□□□□□ -0.69
NEK3-205ENST00000610828 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
NEK3-205ENST00000610828 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
NEK3-205ENST00000610828 ISLRO14498 428 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 HIST1H1BP16401 226 aaKnown RBP10.75□□□□□ -0.69
NEK3-205ENST00000610828 MYCNOSP40205 109 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 EBI3Q14213 229 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 OR8I2Q8N0Y5 310 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 SAA4P35542 130 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 ZNF600Q6ZNG1 722 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 BAGE2Q86Y30 109 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
NEK3-205ENST00000610828 PDLIM4P50479 330 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 UBE2G1P62253 170 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 FAM120AOSQ5T036 256 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 ACACBO00763 2458 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 GNG7O60262 68 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 CBLN1P23435 193 aa10.74□□□□□ -0.69
NEK3-205ENST00000610828 PACRGQ96M98 296 aaPredicted RBP10.74□□□□□ -0.69
NEK3-205ENST00000610828 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
NEK3-205ENST00000610828 IL4P05112 153 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 TCL1AP56279 114 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 COA6Q5JTJ3 125 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms