RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CECR2Q9BXF3 1484 aa-0.22□□□□□ -2.45
HDDC2-207ENST00000608532 MYLKQ15746 1914 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 FREM3P0C091 2139 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 COL24A1Q17RW2 1714 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 M0QX08 132 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 AHSA1O95433 338 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 ZNF682O95780 498 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 FOXA3P55318 350 aaPredicted RBP-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 OR2F1Q13607 317 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 C12orf74Q32Q52 190 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 C2orf82Q6UX34 121 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 ATOH7Q8N100 152 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 C12orf45Q8N5I9 185 aaPredicted RBP-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 LLPHQ9BRT6 129 aaKnown RBP-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 UCK1Q9HA47 277 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 PRTFDC1Q9NRG1 225 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 KIF1BO60333 1816 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 PTPRDP23468 1912 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 KDM6AO15550 1401 aaPredicted RBP-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 TNS3Q68CZ2 1445 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 SPTBP11277 2137 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 KNTC1P50748 2209 aa-0.23□□□□□ -2.45
HDDC2-207ENST00000608532 NUP210LQ5VU65 1888 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 MYO5AQ9Y4I1 1855 aaKnown RBP-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 FAM236DA0A1B0GTK5 79 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 TCRBV4S1A1TA0A5B7 111 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 C7orf71A4D174 169 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 C5orf67F2Z3F1 127 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 H3BRM9 83 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 TGOLN2O43493 480 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 CD3DP04234 171 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 FAM236CP0DP71 79 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 ANP32AP39687 249 aaKnown RBP-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 YPEL3P61236 119 aaPredicted RBP-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 OGFRL1Q5TC84 451 aaPredicted RBP-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 HIST2H3PS2Q5TEC6 136 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 TEN1Q86WV5 123 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 FAM9CQ8IZT9 166 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 OR2T10Q8NGZ9 312 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 PTH2Q96A98 100 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 ATP6V1G3Q96LB4 118 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 PSTPIP2Q9H939 334 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 MRPL27Q9P0M9 148 aaKnown RBP-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 MAP3K5Q99683 1374 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 C9orf84Q5VXU9 1444 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 NUP98P52948 1817 aa-0.24□□□□□ -2.45
HDDC2-207ENST00000608532 HIVEP3Q5T1R4 2406 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 UBR5O95071 2799 aaPredicted RBP-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 OTOGQ6ZRI0 2925 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 TRAV26-2A0A0B4J265 109 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 TRBV30A0A0K0K1B3 111 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 LRRN3E7EW58 273 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 CHP2O43745 196 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 OR4E1P0C645 316 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 OCM2P0CE71 109 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 SMIM10L2AP0DMW4 78 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 SMIM10L2BP0DMW5 78 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 RNASE4P34096 147 aaKnown RBP-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 GLIPR1L1Q6UWM5 242 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 FAM151BQ6UXP7 276 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 PXT1Q8NFP0 134 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 LINC00052Q96N35 136 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 DRC3Q9H069 523 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 TMEM138Q9NPI0 162 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 LSM5Q9Y4Y9 91 aaKnown RBP-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 TMEM56-RWDD3S4R434 201 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 MGAMO43451 1857 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 HMCN2Q8NDA2 5059 aa-0.25□□□□□ -2.45
HDDC2-207ENST00000608532 ARHGEF11O15085 1522 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 BCL9O00512 1426 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 F8W1H4 67 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 PSMD12O00232 456 aaPredicted RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 DEXIO95424 95 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 CRYZL1O95825 349 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 DHFRP00374 187 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 ISG15P05161 165 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 SRIP30626 198 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 NKX2-5P52952 324 aaPredicted RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 RHOBP62745 196 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 TSNQ15631 228 aaKnown RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 SPOPLQ6IQ16 392 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 C8orf74Q6P047 294 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 ZNF833PQ6ZTB9 187 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 ANKRD29Q8N6D5 301 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 OR2T35Q8NGX2 323 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 Q8TAT8 98 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 ZNF431Q8TF32 576 aaPredicted RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 ZC2HC1AQ96GY0 325 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 TP53RKQ96S44 253 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 GPER1Q99527 375 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 PARD6GQ9BYG4 376 aaPredicted RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 CYSLTR1Q9Y271 337 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 UTP11Q9Y3A2 253 aaKnown RBP-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 DOCK4Q8N1I0 1966 aa-0.26□□□□□ -2.45
HDDC2-207ENST00000608532 UBR2Q8IWV8 1755 aa-0.27□□□□□ -2.45
HDDC2-207ENST00000608532 MIA2Q96PC5 1412 aa-0.27□□□□□ -2.45
HDDC2-207ENST00000608532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.27□□□□□ -2.45
HDDC2-207ENST00000608532 OR4C46A6NHA9 309 aa-0.27□□□□□ -2.45
HDDC2-207ENST00000608532 SLC16A4O15374 487 aa-0.27□□□□□ -2.45
HDDC2-207ENST00000608532 GADD45GO95257 159 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms