RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 OR1L4Q8NGR5 311 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 RNF2Q99496 336 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 TXN2Q99757 166 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 SMDT1Q9H4I9 107 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 DNAJC4Q9NNZ3 241 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 C21orf62Q9NYP8 219 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 ABCA1O95477 2261 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 M0R036 132 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 IL17RELQ6ZVW7 336 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 SEPSECSQ9HD40 501 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 ZNF580Q9UK33 172 aa13.82□□□□□ -0.2
SHKBP1-224ENST00000600718 OR5G3P0C626 314 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 HNF1AP20823 631 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 RHOGP84095 191 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 NECAP1Q8NC96 275 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 ISOC2Q96AB3 205 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 PFDN5Q99471 154 aa13.81□□□□□ -0.2
SHKBP1-224ENST00000600718 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 GNG7O60262 68 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 BRI3O95415 125 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 FCGR2BP31994 310 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 TIGITQ495A1 244 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 Q6ZS46 218 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 GNG13Q9P2W3 67 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 LINC00527Q9UJ94 153 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 FUT9Q9Y231 359 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 ELOA3CA0A087WX78 387 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 COX7A2P2O60397 106 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 CXorf1O96002 111 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 IFNA1P01562 189 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 IGKV1-17P01599 117 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 PLP1P60201 277 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 HAGHQ16775 308 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 TMEM86BQ8N661 226 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 TMEM37Q8WXS4 190 aa13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 MRPL32Q9BYC8 188 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-224ENST00000600718 H3BUA1 57 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 PPIFP30405 207 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 PSMB3P49720 205 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 C15orf32Q32M92 178 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 Q56UQ5 140 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 ZNF506Q5JVG8 444 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 FAM24BQ8N5W8 94 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 RARRES2Q99969 163 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 SLC35B3Q9H1N7 401 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 S4R3C0 116 aa13.79□□□□□ -0.2
SHKBP1-224ENST00000600718 RD3LP0DJH9 198 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 PSG1P11464 419 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 YPEL3P61236 119 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 C10orf113Q5VZT2 155 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 SPATA31B1PQ5VZV4 182 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 MS4A10Q96PG2 267 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 TMEM160Q9NX00 188 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 TECRQ9NZ01 308 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 F8W735 103 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 HOXA5P20719 270 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 TAS2R45P59539 299 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 PATE2Q6UY27 113 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 MIR17HGQ75NE6 70 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 NOL4LQ96MY1 436 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 YPEL4Q96NS1 127 aa13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 GAR1Q9NY12 217 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-224ENST00000600718 SVEP1Q4LDE5 3571 aa13.77□□□□□ -0.2
SHKBP1-224ENST00000600718 HYPMO75409 117 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 TOMM40O96008 361 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 BCL2P10415 239 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 ICAM4Q14773 271 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 ZNF502Q8TBZ5 544 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 EEF1AKMT3Q96AZ1 226 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 MANBALQ9NQG1 85 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 DOK5Q9P104 306 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 ITPR3Q14573 2671 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 CSPG4Q6UVK1 2322 aa13.77□□□□□ -0.21
SHKBP1-224ENST00000600718 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 ORM2P19652 201 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 ATP5G2Q06055 141 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 OR1B1Q8NGR6 318 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 C20orf24Q9BUV8 137 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 VAX2Q9UIW0 290 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 FASNP49327 2511 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 CELSR1Q9NYQ6 3014 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms