RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 ZFP69Q49AA0 526 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 BTNL8Q6UX41 500 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 C18orf65Q6ZTR6 163 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
TGFB1-204ENST00000600196 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
TGFB1-204ENST00000600196 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
TGFB1-204ENST00000600196 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
TGFB1-204ENST00000600196 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 AGPAT2O15120 278 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 WIPF1O43516 503 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 CAMLGP49069 296 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 SERF2P84101 59 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PRR20EP86478 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PRR20CP86479 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PRR20DP86480 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PRR20BP86481 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PRR20AP86496 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 TIGITQ495A1 244 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 Q6ZRG5 221 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 OR2K2Q8NGT1 345 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.9
TGFB1-204ENST00000600196 GNPNAT1Q96EK6 184 aaPredicted RBP9.4□□□□□ -0.9
TGFB1-204ENST00000600196 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.9
TGFB1-204ENST00000600196 ARPC5LQ9BPX5 153 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
TGFB1-204ENST00000600196 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.9
TGFB1-204ENST00000600196 FBXL17Q9UF56 701 aa9.4□□□□□ -0.9
TGFB1-204ENST00000600196 KANTRA0A1W2PQU2 76 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 IGHV3-48P01763 117 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 PSG1P11464 419 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 NPPCP23582 126 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 DEFA5Q01523 94 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 OPCMLQ14982 345 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 RNF125Q96EQ8 232 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 RNF2Q99496 336 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 NPCDR1Q9BY65 106 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 ARV1Q9H2C2 271 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
TGFB1-204ENST00000600196 S4R3C0 116 aa9.39□□□□□ -0.91
TGFB1-204ENST00000600196 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 MBP02144 154 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 FGF7P21781 194 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 CRYBB3P26998 211 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 CLINT1Q14677 625 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 DEFB136Q30KP8 78 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 OR1L4Q8NGR5 311 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 GATAD1Q8WUU5 269 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 GRAMD2BQ96HH9 432 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 METTL26Q96S19 204 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 PFDN5Q99471 154 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 MGST2Q99735 147 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 U3KQE9 123 aa9.38□□□□□ -0.91
TGFB1-204ENST00000600196 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 SMLR1H3BR10 107 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 BCL2L11O43521 198 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 HYPMO75409 117 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 YIF1AO95070 293 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 TSPAN15O95858 294 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 CD33P20138 364 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 CBLN1P23435 193 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 EIF2B2P49770 351 aaKnown RBP9.37□□□□□ -0.91
TGFB1-204ENST00000600196 SLURP1P55000 103 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 ZNF90Q03938 601 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 EIF5AL1Q6IS14 154 aaKnown RBP9.37□□□□□ -0.91
TGFB1-204ENST00000600196 TMUB2Q71RG4 321 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 STOML3Q8TAV4 291 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 GPR82Q96P67 336 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 ARL6Q9H0F7 186 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 WFDC1Q9HC57 220 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 SMPXQ9UHP9 88 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 RABAC1Q9UI14 185 aa9.37□□□□□ -0.91
TGFB1-204ENST00000600196 IGHV7-4-1A0A0J9YVY3 117 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 IL4P05112 153 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
TGFB1-204ENST00000600196 LINC00869P0C866 280 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 CXCL2P19875 107 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 B2MP61769 119 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 LGALSLQ3ZCW2 172 aaPredicted RBP9.36□□□□□ -0.91
TGFB1-204ENST00000600196 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 SLC51BQ86UW2 128 aa9.36□□□□□ -0.91
TGFB1-204ENST00000600196 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms