RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 NOXA1Q86UR1 476 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 UBE2DNLQ8IWF7 75 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 LINC00052Q96N35 136 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 PRR13Q9NZ81 148 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
LINC01842-201ENST00000588275 DYNC1H1Q14204 4646 aaKnown RBP12.05□□□□□ -0.48
LINC01842-201ENST00000588275 CRYM-AS1A6NIL9 109 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 CTF1Q16619 201 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 GDF5OSQ5U4N7 250 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 RNF125Q96EQ8 232 aa12.05□□□□□ -0.48
LINC01842-201ENST00000588275 SEPSECSQ9HD40 501 aaKnown RBP12.05□□□□□ -0.48
LINC01842-201ENST00000588275 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
LINC01842-201ENST00000588275 SURF2Q15527 256 aaPredicted RBP12.04□□□□□ -0.48
LINC01842-201ENST00000588275 NMSQ5H8A3 153 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 OR4C16Q8NGL9 310 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 COQ8AQ8NI60 647 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 MIXL1Q9H2W2 232 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 DNAH11Q96DT5 4516 aa12.04□□□□□ -0.48
LINC01842-201ENST00000588275 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 AKAIN1P0CW23 69 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 NUP62P37198 522 aaPredicted RBP12.03□□□□□ -0.48
LINC01842-201ENST00000588275 SSBP1Q04837 148 aaKnown RBP12.03□□□□□ -0.48
LINC01842-201ENST00000588275 GSG1LQ6UXU4 331 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 ZNF705AQ6ZN79 300 aaPredicted RBP12.03□□□□□ -0.48
LINC01842-201ENST00000588275 LGI3Q8N145 548 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 OR4B1Q8NGF8 309 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
LINC01842-201ENST00000588275 TMEM189A5PLL7 270 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 RTL8CO15255 209 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 IFNA21P01568 189 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 HTN3P15516 51 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 ID1P41134 155 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 LYZP61626 148 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 MRPS10P82664 201 aaKnown RBP12.02□□□□□ -0.49
LINC01842-201ENST00000588275 KLF9Q13886 244 aaPredicted RBP12.02□□□□□ -0.49
LINC01842-201ENST00000588275 IL18Q14116 193 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
LINC01842-201ENST00000588275 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 SMIM4Q8WVI0 70 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 NEU1Q99519 415 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 PRRT1Q99946 306 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 WDR12Q9GZL7 423 aaKnown RBP12.02□□□□□ -0.49
LINC01842-201ENST00000588275 RBKSQ9H477 322 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 PFDN2Q9UHV9 154 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 KCNIP3Q9Y2W7 256 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 RFNGQ9Y644 331 aa12.02□□□□□ -0.49
LINC01842-201ENST00000588275 PKD1P98161 4303 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 ZNF705FA8MVS1 300 aaPredicted RBP12.01□□□□□ -0.49
LINC01842-201ENST00000588275 CTDSP2O14595 271 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 ZNF705DP0CH99 300 aaPredicted RBP12.01□□□□□ -0.49
LINC01842-201ENST00000588275 ZNF705BP0CI00 300 aaPredicted RBP12.01□□□□□ -0.49
LINC01842-201ENST00000588275 ZNF90Q03938 601 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 FOXI2Q6ZQN5 318 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 SLC35E1Q96K37 410 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
LINC01842-201ENST00000588275 CACFD1Q9UGQ2 172 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 U3KQ87 197 aa12.01□□□□□ -0.49
LINC01842-201ENST00000588275 OR2F1Q13607 317 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 SMCO1Q147U7 214 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 OR8G2PQ6IF36 304 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 IL22RA2Q969J5 263 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
LINC01842-201ENST00000588275 SLC35B3Q9H1N7 401 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
LINC01842-201ENST00000588275 RYR1P21817 5038 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 SMIM9A6NGZ8 99 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 F6UB75 175 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 SMIM18P0DKX4 95 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 MED14OSP0DP75 135 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 AKR1C4P17516 323 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 PSMB3P49720 205 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 CCR6P51684 374 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 SUPT4H1P63272 117 aaKnown RBP11.99□□□□□ -0.49
LINC01842-201ENST00000588275 LYZL2Q7Z4W2 148 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 ZNF709Q8N972 641 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 DIRAS2Q96HU8 199 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 MCUBQ9NWR8 336 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 DKK2Q9UBU2 259 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 PAIP2BQ9ULR5 123 aaKnown RBP11.99□□□□□ -0.49
LINC01842-201ENST00000588275 GOLT1BQ9Y3E0 138 aa11.99□□□□□ -0.49
LINC01842-201ENST00000588275 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 HBE1P02100 147 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 GAMTQ14353 236 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 LGALS9BQ3B8N2 356 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 EBLN2Q6P2I7 272 aa11.98□□□□□ -0.49
LINC01842-201ENST00000588275 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms