RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ATP5G3P48201 142 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ICAM4Q14773 271 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 GUK1Q16774 197 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 C10orf113Q5VZT2 155 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 DPPA3Q6W0C5 159 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 IL34Q6ZMJ4 242 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 Q8N2B8 174 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TMEM86BQ8N661 226 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 NECAP1Q8NC96 275 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR1L6Q8NGR2 347 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 LRRC20Q8TCA0 184 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 VN1R17PQ8TDU5 208 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 EEF1AKMT3Q96AZ1 226 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TMEM68Q96MH6 324 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TREM1Q9NP99 234 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TMEM160Q9NX00 188 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FUT9Q9Y231 359 aa4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 YTHDF2Q9Y5A9 579 aaKnown RBP4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PUS1Q9Y606 427 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF469Q96JG9 3925 aaPredicted RBP4.75□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TRAV1-1A0A0B4J248 108 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 A0A1W2PPV4 95 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 WI2-2373I1.2A0A1W2PRP0 233 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CLPSL1A2RUU4 121 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FAM223BA6NKX1 122 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 BMPR1BO00238 502 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CYB5BO43169 146 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TGOLN2O43493 480 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PAGE4O60829 102 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 HYPMO75409 117 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR2C1O95371 312 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MBP02144 154 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 APOHP02749 345 aaPredicted RBP4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RNASE1P07998 156 aaKnown RBP4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 STAG3L2P0CL84 134 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 STAG3L3P0CL85 134 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 BCL2P10415 239 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 NPBWR1P48145 328 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PPT1P50897 306 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RAB9AP51151 201 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CEBPGP53567 150 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 HILS1P60008 231 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RPL15P61313 204 aaKnown RBP4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 DEFB136Q30KP8 78 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TOMM20LQ6UXN7 152 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 UNQ9165/PRO28630Q6UXU0 137 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FAM223AQ8IWN6 122 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TEX29Q8N6K0 151 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 KLHDC1Q8N7A1 406 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF491Q8N8L2 437 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR5AU1Q8NGC0 362 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR4X2Q8NGF9 303 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 NARS2Q96I59 477 aaKnown RBP4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FAM210AQ96ND0 272 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZFAND3Q9H8U3 227 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 KCNIP2Q9NS61 270 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CDC42EP3Q9UKI2 254 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 HIGD1AQ9Y241 93 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ACANP16112 2415 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 WNK2Q9Y3S1 2297 aa4.74□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TNCP24821 2201 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 A0A1W2PRX2 142 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RBFOX3A6NFN3 312 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 H3BRN7 92 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 NUPL2O15504 423 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR7C2O60412 319 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SCO1O75880 301 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 HBE1P02100 147 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CD5P06127 495 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SRP19P09132 144 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SFTA3P0C7M3 94 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 C8orf88P0DMB2 117 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CD28P10747 220 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 NPPCP23582 126 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FCGR2BP31994 310 aaPredicted RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ARL3P36405 182 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PLP1P60201 277 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 KRTAP10-3P60369 221 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 YPEL3P61236 119 aaPredicted RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SELENOTP62341 195 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RHOBP62745 196 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF506Q5JVG8 444 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 LINC00305Q7Z4B0 112 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OR1L4Q8NGR5 311 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MYOZ3Q8TDC0 251 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF418Q8TF45 676 aaPredicted RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 RNF125Q96EQ8 232 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SHANK2-AS3Q9BTD1 123 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SLC25A39Q9BZJ4 359 aaPredicted RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 EIF5A2Q9GZV4 153 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TECRQ9NZ01 308 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms