RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-215	ENST00000580182	MBP	P02686	304 aa	Predicted RBP	13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	P2RY1	P47900	373 aa		13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	RPL11	P62913	178 aa	Known RBP	13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	NRARP	Q7Z6K4	114 aa		13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	APRG1	Q8IVJ8	170 aa		13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	SMIM8	Q96KF7	97 aa		13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	SPATA25	Q9BR10	227 aa		13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	RCL1	Q9Y2P8	373 aa	Known RBP	13.86	□□□□□ -0.19
PPP4R1-215	ENST00000580182	PMS2P5	A8MQ11	134 aa		13.85	□□□□□ -0.19
PPP4R1-215	ENST00000580182	OR2F1	Q13607	317 aa		13.85	□□□□□ -0.19
PPP4R1-215	ENST00000580182	FAM24B	Q8N5W8	94 aa		13.85	□□□□□ -0.19
PPP4R1-215	ENST00000580182	TMEM231	Q9H6L2	316 aa		13.85	□□□□□ -0.19
PPP4R1-215	ENST00000580182	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	C5orf51	A6NDU8	294 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	DNASE2	O00115	360 aa	Predicted RBP	13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	IL5	P05113	134 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	CD5	P06127	495 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	PAFAH1B2	P68402	229 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	OR8G2P	Q6IF36	304 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	C16orf54	Q6UWD8	224 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	ACOT7L	Q6ZUV0	252 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	THAP8	Q8NA92	274 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	RNF125	Q96EQ8	232 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	NARS2	Q96I59	477 aa	Known RBP	13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	TRGV9	Q99603	122 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	FAM110A	Q9BQ89	295 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	PBDC1	Q9BVG4	233 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	GGTLC1	Q9BX51	225 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	MAP6D1	Q9H9H5	199 aa		13.84	□□□□□ -0.19
PPP4R1-215	ENST00000580182	TMEM14EP	Q6UXP3	125 aa		13.83	□□□□□ -0.2
PPP4R1-215	ENST00000580182	STXBP6	Q8NFX7	210 aa		13.83	□□□□□ -0.2
PPP4R1-215	ENST00000580182	GLMP	Q8WWB7	406 aa		13.83	□□□□□ -0.2
PPP4R1-215	ENST00000580182	RAB40C	Q96S21	281 aa		13.83	□□□□□ -0.2
PPP4R1-215	ENST00000580182	RABAC1	Q9UI14	185 aa		13.83	□□□□□ -0.2
PPP4R1-215	ENST00000580182	STAB2	Q8WWQ8	2551 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	NBEAL2	Q6ZNJ1	2754 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	C7orf66	A4D0T2	115 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	METTL15P1	P0C7V9	234 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	LYZ	P61626	148 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	STPG3	Q8N7X2	389 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	GRAMD2B	Q96HH9	432 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	C2orf50	Q96LR7	162 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	LSM5	Q9Y4Y9	91 aa	Known RBP	13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DNAH7	Q8WXX0	4024 aa		13.82	□□□□□ -0.2
PPP4R1-215	ENST00000580182	SMCO3	A2RU48	225 aa		13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182		K7EPK0	472 aa		13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	BUB3	O43684	328 aa		13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	RPL35A	P18077	110 aa	Known RBP	13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	GATA2	P23769	480 aa	Predicted RBP	13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	TAS2R30	P59541	319 aa		13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	RRAS2	P62070	204 aa	Predicted RBP	13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	AKR1C1	Q04828	323 aa		13.81	□□□□□ -0.2
PPP4R1-215	ENST00000580182	TRAV2	A0A0B4J234	112 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	SNRPGP15	A8MWD9	76 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	INMT-MINDY4	F8WBC2	141 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182		K7EQG2	157 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	TSC22D2	O75157	780 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	EIF2B2	P49770	351 aa	Known RBP	13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DEFB131A	P59861	70 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	ARL16	Q0P5N6	197 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	LEMD1	Q68G75	181 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	GSG1L	Q6UXU4	331 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DCANP1	Q8TF63	244 aa		13.8	□□□□□ -0.2
PPP4R1-215	ENST00000580182	FABP1	P07148	127 aa		13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	CMC4	P56277	68 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	IL15RA	Q13261	267 aa		13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	TMEM144	Q7Z5S9	345 aa		13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	C11orf1	Q9H5F2	150 aa		13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	GPN1	Q9HCN4	374 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP4R1-215	ENST00000580182	HELT	A6NFD8	242 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182		L7N2F9	121 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	SIX6	O95475	246 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DEFA1	P59665	94 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DEFA3	P59666	94 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	VAMP2	P63027	116 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	DLK1	P80370	383 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	OR10P1	Q8NGE3	313 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	MARVELD1	Q9BSK0	173 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	EDA2R	Q9HAV5	297 aa		13.78	□□□□□ -0.2
PPP4R1-215	ENST00000580182	ZNF688	P0C7X2	276 aa		13.77	□□□□□ -0.21
PPP4R1-215	ENST00000580182	S100A10	P60903	97 aa		13.77	□□□□□ -0.21
PPP4R1-215	ENST00000580182	RAB32	Q13637	225 aa		13.77	□□□□□ -0.21
PPP4R1-215	ENST00000580182	SIGLEC15	Q6ZMC9	328 aa		13.77	□□□□□ -0.21
PPP4R1-215	ENST00000580182	FAM24A	A6NFZ4	105 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	GOSR2	O14653	212 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	BCAP31	P51572	246 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	AP2S1	P53680	142 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	APOC4	P55056	127 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	CYP2G1P	Q6ZSU1	146 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	OVOL2	Q9BRP0	275 aa		13.76	□□□□□ -0.21
PPP4R1-215	ENST00000580182	PRAF2	O60831	178 aa		13.75	□□□□□ -0.21
PPP4R1-215	ENST00000580182	ORM2	P19652	201 aa		13.75	□□□□□ -0.21
PPP4R1-215	ENST00000580182	CAV2	P51636	162 aa		13.75	□□□□□ -0.21
PPP4R1-215	ENST00000580182	BPIFC	Q8NFQ6	507 aa		13.75	□□□□□ -0.21
PPP4R1-215	ENST00000580182	PPP1R14B	Q96C90	147 aa		13.75	□□□□□ -0.21
PPP4R1-215	ENST00000580182	KIR2DL5B	A0A0G2JN68	375 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	KIR2DL5B	A0A0G2JPC4	375 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	CST7	O76096	145 aa		13.74	□□□□□ -0.21

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