RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 SPANXN4Q5MJ08 99 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 C1orf140Q5VVS0 124 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 CLEC19AQ6UXS0 136 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 DPPA3Q6W0C5 159 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 SAMD9LQ8IVG5 1584 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 RFLNBQ8N5W9 214 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 LINC00311Q8N616 119 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 METTL27Q8N6F8 245 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-204ENST00000577468 C18orf32Q8TCD1 76 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 IGFBPL1Q8WX77 278 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 CCL17Q92583 94 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 SLC25A38Q96DW6 304 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 TVP23CQ96ET8 276 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 C18orf15Q96N68 181 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 VGLL1Q99990 258 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 TM2D3Q9BRN9 247 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 OVOL2Q9BRP0 275 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 EIF5A2Q9GZV4 153 aaKnown RBP2.38□□□□□ -2.03
PTPRM-204ENST00000577468 PLAC1Q9HBJ0 212 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 OCIAD1Q9NX40 245 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 TAAR3PQ9P1P4 343 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 C19orf25Q9UFG5 118 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-204ENST00000577468 ANAPC10Q9UM13 185 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 KCNE3Q9Y6H6 103 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 RGPD3A6NKT7 1758 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-204ENST00000577468 C2orf16Q68DN1 1984 aa2.38□□□□□ -2.03
PTPRM-204ENST00000577468 PLXNA4Q9HCM2 1894 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 TRAV9-2A0A087WT02 112 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 TRAV14DV4A0A0A6YYC5 116 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 IGLV5-39A0A0G2JS06 123 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 MUC21A0A140T8X8 626 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 LOC107986453A0A1B0GWG9 222 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 FAM24AA6NFZ4 105 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 SNURFLB1AK76 121 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 EPM2AB3EWF7 344 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 H3BMG7 143 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 K7N7A8 449 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 M0R129 80 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 UPK2O00526 184 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 GNGT2O14610 69 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ZNF253O75346 499 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 SRSF10O75494 262 aaKnown RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CD3DP04234 171 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CD55P08174 381 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ZNF688P0C7X2 276 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CXCL5P42830 114 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 INSL3P51460 131 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 B3GALT5-AS1P59052 145 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CYCSP99999 105 aaKnown RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ABCA11PQ4W5N1 156 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 MUC21Q5SSG8 566 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ATP1A1-AS1Q5TC04 95 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 FAM222AQ5U5X8 452 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ZNF322Q6U7Q0 402 aaPredicted RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 VN1R4Q7Z5H5 301 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 WDR86Q86TI4 376 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 RNF182Q8N6D2 247 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 SIGLECL1Q8N7X8 197 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 PPDPFLQ8WWR9 84 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 NABP1Q96AH0 204 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 PRELID3AQ96N28 172 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 OR2A5Q96R48 311 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 C20orf78Q9BR46 151 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 IL25Q9H293 177 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 LIME1Q9H400 295 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 BCL2L10Q9HD36 194 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 DEPPQ9NTK1 212 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CKLFQ9UBR5 152 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 LSM2Q9Y333 95 aaKnown RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 CICQ96RK0 1608 aaPredicted RBP2.37□□□□□ -2.03
PTPRM-204ENST00000577468 PXDNQ92626 1479 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 PLCH1Q4KWH8 1693 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 DSPPQ9NZW4 1301 aa2.37□□□□□ -2.03
PTPRM-204ENST00000577468 ZFC3H1O60293 1989 aaKnown RBP2.36□□□□□ -2.03
PTPRM-204ENST00000577468 DNMT1P26358 1616 aaKnown RBP2.36□□□□□ -2.03
PTPRM-204ENST00000577468 AFDNP55196 1824 aaKnown RBP2.36□□□□□ -2.03
PTPRM-204ENST00000577468 TRAV9-1A0A075B6T8 112 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 LOC100131303A0A0U1RQF7 123 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 IRGMA1A4Y4 181 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 RBMY1BA6NDE4 496 aaKnown RBP2.36□□□□□ -2.03
PTPRM-204ENST00000577468 PGPA6NDG6 321 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 RBMY1EA6NEQ0 496 aaKnown RBP2.36□□□□□ -2.03
PTPRM-204ENST00000577468 C9JQL5 133 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 H3BT86 120 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 H3BUT2 72 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 LGALS9O00182 355 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 UBE2L6O14933 153 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 NDUFB3O43676 98 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 NDUFS7O75251 213 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 CST7O76096 145 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 RBP4P02753 201 aa2.36□□□□□ -2.03
PTPRM-204ENST00000577468 TCRAP04437 139 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms