RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ADMP35318 185 aa18.59■□□□□ 0.57
ATPAF1-213ENST00000574428 ZNF343Q6P1L6 599 aa18.59■□□□□ 0.57
ATPAF1-213ENST00000574428 FAM213BQ8TBF2 198 aa18.59■□□□□ 0.57
ATPAF1-213ENST00000574428 TRAV30A0A087WSZ9 112 aa18.58■□□□□ 0.57
ATPAF1-213ENST00000574428 RPL29P47914 159 aaKnown RBP18.58■□□□□ 0.57
ATPAF1-213ENST00000574428 FFAR4Q5NUL3 377 aa18.58■□□□□ 0.57
ATPAF1-213ENST00000574428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 NUPL2O15504 423 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 TGOLN2O43493 480 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 LINC00869P0C866 280 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 CD28P10747 220 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 B2MP61769 119 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 PRR20EP86478 221 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 PRR20CP86479 221 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 PRR20DP86480 221 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 PRR20BP86481 221 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 PRR20AP86496 221 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 KHDC1LQ5JSQ8 128 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 UBE2E2Q96LR5 201 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 KCNIP2Q9NS61 270 aa18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 GAR1Q9NY12 217 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-213ENST00000574428 SRSF3P84103 164 aaKnown RBP18.57■□□□□ 0.56
ATPAF1-213ENST00000574428 VSIRQ9H7M9 311 aa18.57■□□□□ 0.56
ATPAF1-213ENST00000574428 SLC39A9Q9NUM3 307 aa18.57■□□□□ 0.56
ATPAF1-213ENST00000574428 IGHV3-35A0A0C4DH35 117 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 TSPAN15O95858 294 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 PSG1P11464 419 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 ARL3P36405 182 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 SELENOTP62341 195 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 AKR1C8PQ5T2L2 129 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 PRIMA1Q86XR5 153 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 ATP6V0BQ99437 205 aa18.56■□□□□ 0.56
ATPAF1-213ENST00000574428 SCGB2A1O75556 95 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 YIF1AO95070 293 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 RD3LP0DJH9 198 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 SERF2P84101 59 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 GCSAMLQ5JQS6 135 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 C18orf65Q6ZTR6 163 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 CCDC28AQ8IWP9 274 aa18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 YPEL3P61236 119 aaPredicted RBP18.55■□□□□ 0.56
ATPAF1-213ENST00000574428 TOMM40O96008 361 aa18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 FABP1P07148 127 aa18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 LGALS1P09382 135 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 RAB2AP61019 212 aa18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 NARS2Q96I59 477 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 ZNF414Q96IQ9 312 aa18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 TMEM231Q9H6L2 316 aa18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 PEF1Q9UBV8 284 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-213ENST00000574428 SPSB3Q6PJ21 355 aa18.53■□□□□ 0.56
ATPAF1-213ENST00000574428 DOK5Q9P104 306 aa18.53■□□□□ 0.56
ATPAF1-213ENST00000574428 BMPR1BO00238 502 aa18.53■□□□□ 0.56
ATPAF1-213ENST00000574428 CDX1P47902 265 aaPredicted RBP18.53■□□□□ 0.56
ATPAF1-213ENST00000574428 CITED2Q99967 270 aaPredicted RBP18.53■□□□□ 0.56
ATPAF1-213ENST00000574428 A0A1B0GUS0 222 aa18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 KRTAP10-3P60369 221 aa18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 TMEM41BQ5BJD5 291 aa18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 DPPA3Q6W0C5 159 aa18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 RPRMQ9NS64 109 aa18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 PUS1Q9Y606 427 aaKnown RBP eCLIP18.52■□□□□ 0.55
ATPAF1-213ENST00000574428 LYZP61626 148 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 FOXL1Q12952 345 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 KRTAP24-1Q3LI83 254 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 ZNF600Q6ZNG1 722 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 OR51G1Q8NGK1 321 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 Q8WTZ3 238 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 TREM1Q9NP99 234 aa18.51■□□□□ 0.55
ATPAF1-213ENST00000574428 IGHV3OR16-8A0A075B7F1 116 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 A0A1W2PRX2 142 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 OR2C1O95371 312 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 IL4P05112 153 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 ORM2P19652 201 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 ACOT6Q3I5F7 207 aaPredicted RBP18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 KLHL30-AS1Q8NEE0 82 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 OR10G4Q8NGN3 311 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 OR10G9Q8NGN4 311 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 OR10G7Q8NGN6 311 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 OR1B1Q8NGR6 318 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 C4orf3Q8WVX3 66 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 PBDC1Q9BVG4 233 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 A0A1B0GV50 99 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 TMEM218A2RU14 115 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 M6PRP20645 277 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 RELQ04864 619 aaPredicted RBP18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 DEFB136Q30KP8 78 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 FAM209BQ5JX69 171 aa18.5■□□□□ 0.55
ATPAF1-213ENST00000574428 MBP02144 154 aa18.49■□□□□ 0.55
ATPAF1-213ENST00000574428 H2AFB1P0C5Y9 115 aa18.49■□□□□ 0.55
ATPAF1-213ENST00000574428 RPP25LQ8N5L8 163 aaKnown RBP18.49■□□□□ 0.55
ATPAF1-213ENST00000574428 IGHV4OR15-8A0A075B7B6 117 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 A0A087WW49 117 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 COX7A2P2O60397 106 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 GGCTO75223 188 aaKnown RBP18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 EIF3GO75821 320 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 CD5P06127 495 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 FAM122CQ6P4D5 195 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 TOMM20LQ6UXN7 152 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 WFDC12Q8WWY7 111 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 TMEM37Q8WXS4 190 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 RNF125Q96EQ8 232 aa18.48■□□□□ 0.55
ATPAF1-213ENST00000574428 RCC1LQ96I51 464 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 658 ms