RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-205ENST00000567549 HRH4Q9H3N8 390 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 KCNIP3Q9Y2W7 256 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 IGHV3-66A0A0C4DH42 116 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 A0A1B0GU03 582 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 CEBPZOSA8MTT3 80 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 MIFP14174 115 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 BSXQ3C1V8 233 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 C2orf83Q53S99 150 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 LEMD1Q68G75 181 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 SEC22CQ9BRL7 303 aa13.63□□□□□ -0.23
LINC01238-205ENST00000567549 K7EQG2 157 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 APOHP02749 345 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-205ENST00000567549 OR5AC1P0C628 307 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-205ENST00000567549 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
LINC01238-205ENST00000567549 TMEM128Q5BJH2 165 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 SLC24A4Q8NFF2 622 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 C1QTNF4Q9BXJ3 329 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 NAA60Q9H7X0 242 aa13.62□□□□□ -0.23
LINC01238-205ENST00000567549 SULT1A3P0DMM9 295 aa13.61□□□□□ -0.23
LINC01238-205ENST00000567549 SULT1A4P0DMN0 295 aa13.61□□□□□ -0.23
LINC01238-205ENST00000567549 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
LINC01238-205ENST00000567549 FCN2Q15485 313 aa13.61□□□□□ -0.23
LINC01238-205ENST00000567549 IL22RA2Q969J5 263 aa13.61□□□□□ -0.23
LINC01238-205ENST00000567549 FNDC4Q9H6D8 234 aaPredicted RBP13.61□□□□□ -0.23
LINC01238-205ENST00000567549 SEPSECSQ9HD40 501 aaKnown RBP13.61□□□□□ -0.23
LINC01238-205ENST00000567549 AKR1C4P17516 323 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 OR10J1P30954 320 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 DHRS2Q13268 280 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
LINC01238-205ENST00000567549 TCTE3Q8IZS6 198 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 C12orf45Q8N5I9 185 aaPredicted RBP13.6□□□□□ -0.23
LINC01238-205ENST00000567549 GLYATL2Q8WU03 294 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 RTBDNQ9BSG5 229 aaPredicted RBP13.6□□□□□ -0.23
LINC01238-205ENST00000567549 CACNG5Q9UF02 275 aa13.6□□□□□ -0.23
LINC01238-205ENST00000567549 PLECQ15149 4684 aaKnown RBP13.6□□□□□ -0.23
LINC01238-205ENST00000567549 C9orf170A2RU37 121 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 ZNF688P0C7X2 276 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 ANXA3P12429 323 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 RND2P52198 227 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 ATP5IP56385 69 aaPredicted RBP13.59□□□□□ -0.23
LINC01238-205ENST00000567549 SRPXP78539 464 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 TIGITQ495A1 244 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 ASB13Q8WXK3 278 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 U3KQ87 197 aa13.59□□□□□ -0.23
LINC01238-205ENST00000567549 A0A0B4J2A0 478 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 CRYM-AS1A6NIL9 109 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 IGKV1-17P01599 117 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 FABP1P07148 127 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 NPY1RP25929 384 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 PPP1R1AQ13522 171 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 OR11H7Q8NGC8 314 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 MITD1Q8WV92 249 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 MGAT4CQ9UBM8 478 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 SHPKQ9UHJ6 478 aa13.58□□□□□ -0.24
LINC01238-205ENST00000567549 A0A0G2JRQ6 117 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 SFT2D2O95562 160 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 IGLC1P0CG04 106 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 VAMP1P23763 118 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 CD300CQ08708 224 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 ACTL10Q5JWF8 245 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 PRSS54Q6PEW0 395 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
LINC01238-205ENST00000567549 Q8NAQ8 132 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 DCANP1Q8TF63 244 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 TMEM56-RWDD3S4R434 201 aa13.57□□□□□ -0.24
LINC01238-205ENST00000567549 TRAV10A0A0B4J240 114 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 IFNA10P01566 189 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 IL4P05112 153 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 RD3LP0DJH9 198 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 ZFP69Q49AA0 526 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 C16orf54Q6UWD8 224 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 Q6ZRM9 215 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 COQ8AQ8NI60 647 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 NRN1Q9NPD7 142 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 U3KQE9 123 aa13.56□□□□□ -0.24
LINC01238-205ENST00000567549 ZNF705EA8MWA4 302 aaPredicted RBP13.55□□□□□ -0.24
LINC01238-205ENST00000567549 IGLL5B9A064 214 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 TOMM40O96008 361 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 GIPP09681 153 aaPredicted RBP13.55□□□□□ -0.24
LINC01238-205ENST00000567549 CXCL3P19876 107 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 RAP2BP61225 183 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 MLANAQ16655 118 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 PSMG4Q5JS54 123 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 GPR146Q96CH1 333 aa13.55□□□□□ -0.24
LINC01238-205ENST00000567549 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
LINC01238-205ENST00000567549 IGHV4-28A0A0C4DH34 117 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 DEFB4AO15263 64 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 C1QBP02746 253 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 SAMD13Q5VXD3 122 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 SIGLEC15Q6ZMC9 328 aa13.54□□□□□ -0.24
LINC01238-205ENST00000567549 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms