RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	HLA-DRB4	P13762	266 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	HLA-DRB4	X5D2U9	266 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	METTL12	A8MUP2	240 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	CTRL	P40313	264 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	LYPD6	Q86Y78	171 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	TEX48	A0A1B0GUV7	120 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	SCO2	A0A1W2PP80	73 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	IGKV3-11	P04433	115 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF56	Q15929	161 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	PTH2	Q96A98	100 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	OTOGL	Q3ZCN5	2332 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ZG16	O60844	167 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	RASL11B	Q9BPW5	248 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	HAPLN4	Q86UW8	402 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	HCFC2	Q9Y5Z7	792 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	FHL1	Q13642	323 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PF4V1	P10720	104 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	VSIR	Q9H7M9	311 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	DGAT2L7P	Q6IED9	249 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	DTX1	Q86Y01	620 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	FZR1	Q9UM11	496 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	F11R	Q9Y624	299 aa	Known RBP	3.53	□□□□□ -1.84
MACF1-231	ENST00000564288		A0A0A6YYD4	124 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	SMIM20	Q8N5G0	67 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	ABCA12	Q86UK0	2595 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	IGHG4	P01861	327 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	FXYD3	Q14802	87 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF492	Q9P255	531 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	ABHD17A	Q96GS6	310 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	IGLL5	B9A064	214 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	SAP30	O75446	220 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PILRB	Q9UKJ0	227 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	EDDM3A	Q14507	147 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	FAM60A	Q9NP50	221 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PHF3	Q92576	2039 aa	Known RBP	3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PRSS46	E5RG02	174 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288		E9PLD3	99 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	NDUFS7	O75251	213 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	CCL26	Q9Y258	94 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	RBP4	P02753	201 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	BRCA1	P38398	1863 aa	Known RBP	3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PRR30	Q53SZ7	412 aa	Predicted RBP	3.53	□□□□□ -1.84
MACF1-231	ENST00000564288		K7ESF4	209 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	RRH	O14718	337 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	TREML4	Q6UXN2	200 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	PRSS29P	A6NIE9	313 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	C1orf210	Q8IVY1	113 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	ST6GALNAC6	Q969X2	333 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	DEFB118	Q96PH6	123 aa		3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	SPAG8	Q99932	426 aa	Predicted RBP	3.53	□□□□□ -1.84
MACF1-231	ENST00000564288	TNFRSF6B	O95407	300 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288		Q6Q795	121 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	PLXNB2	O15031	1838 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	CDKN1A	P38936	164 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	FAM104B	Q5XKR9	115 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	MOGAT3	Q86VF5	341 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	ZNF714	Q96N38	554 aa		3.53	□□□□□ -1.85
MACF1-231	ENST00000564288	IGKV3D-15	A0A087WSY6	115 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	TRAV8-1	A0A0A6YYK1	113 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	MFAP4	P55083	255 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288		Q6ZVH6	145 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	TEN1	Q86WV5	123 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	DEPP	Q9NTK1	212 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	DEFB108A	A8MXU0	73 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	DNAJC30	Q96LL9	226 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	NDUFV3	P56181	108 aa	Known RBP	3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	ZNF497	Q6ZNH5	498 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	CELA2B	P08218	269 aa	Predicted RBP	3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	SCRG1	O75711	98 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	KLRB1	Q12918	225 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	MIR17HG	Q75NE6	70 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	AMN1	Q8IY45	258 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	MOB4	Q9Y3A3	225 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	LY6D	Q14210	128 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	PVRIG	Q6DKI7	326 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	COL4A6	Q14031	1691 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	UTF1	Q5T230	341 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	TRBV20OR9-2	A0A075B6H5	130 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	ZFP36L1	Q07352	338 aa	Known RBP	3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	PIFO	Q8TCI5	191 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	TMEM141	Q96I45	108 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288		F5H697	171 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	DMRTC1	Q5HYR2	192 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	MRAP	Q8TCY5	172 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	COL11A2	P13942	1736 aa	Predicted RBP	3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	IGKV3D-11	A0A0A0MRZ8	115 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	FOXC2	Q99958	501 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	PRR7	Q8TB68	274 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	HCST	Q9UBK5	93 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	CD40	P25942	277 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	C8orf31	Q8N9H6	132 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288		M0R2P5	195 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	CXCL13	O43927	109 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	TM4SF20	Q53R12	229 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	LINC00643	Q86TS7	51 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	SCRT2	Q9NQ03	307 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	NDUFA3	O95167	84 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	C2orf83	Q53S99	150 aa		3.52	□□□□□ -1.85
MACF1-231	ENST00000564288	IGKV1D-8	A0A087WSZ0	117 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms