RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-215	ENST00000558868	ZNF355P	Q9NSJ1	428 aa		10.82	□□□□□ -0.68
TPM1-215	ENST00000558868	ZNF580	Q9UK33	172 aa		10.82	□□□□□ -0.68
TPM1-215	ENST00000558868	TRBV9	A0A0B4J1U6	114 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868		F6UZH7	168 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868		H3BUA1	57 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	AP4M1	O00189	453 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	PDE6D	O43924	150 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	PAGE4	O60829	102 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	EIF3G	O75821	320 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	NDUFB8	O95169	186 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	BRI3	O95415	125 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	TOMM40	O96008	361 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	ORM2	P19652	201 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	S100A7	P31151	101 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	TIGIT	Q495A1	244 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	FAM74A3	Q4VXF1	159 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868		Q6YL49	198 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	CYB561D1	Q8N8Q1	229 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	OR51G1	Q8NGK1	321 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	OR1B1	Q8NGR6	318 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	ATP6V0B	Q99437	205 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	NKX6-2	Q9C056	277 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	PRDM13	Q9H4Q3	707 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	DOK5	Q9P104	306 aa		10.81	□□□□□ -0.68
TPM1-215	ENST00000558868	MDFIC2	A0A1B0GVS7	189 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	SH2D7	A6NKC9	451 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	FAM223B	A6NKX1	122 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	C11orf94	C9JXX5	98 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	SMAD7	O15105	426 aa	Known RBP	10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	OR7C2	O60412	319 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	IGKV1-17	P01599	117 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	IGHV4-59	P01825	116 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	PSG1	P11464	419 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	CEBPG	P53567	150 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	RHOG	P84095	191 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	GUCA2B	Q16661	112 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	C19orf54	Q5BKX5	351 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	FAM223A	Q8IWN6	122 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	OR4F5	Q8NH21	305 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868		Q8WTZ3	238 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	EEF1AKMT3	Q96AZ1	226 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	OR4F4	Q96R69	305 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	RNF24	Q9Y225	148 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	HIGD1A	Q9Y241	93 aa		10.8	□□□□□ -0.68
TPM1-215	ENST00000558868	TRBV7-1	A0A0A6YYK4	115 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	LINC01548	A6NM66	108 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868		G3V318	75 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	CD81	P60033	236 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	CST9LP1	Q5W188	147 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	PATE2	Q6UY27	113 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	LINC00305	Q7Z4B0	112 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	CLRN3	Q8NCR9	226 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	UHRF2	Q96PU4	802 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	NIPSNAP3B	Q9BS92	247 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	GSX1	Q9H4S2	264 aa	Predicted RBP	10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	VPREB3	Q9UKI3	123 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	APC	P25054	2843 aa		10.79	□□□□□ -0.68
TPM1-215	ENST00000558868	NUPL2	O15504	423 aa	Known RBP	10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	CD5L	O43866	347 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	LYZ	P61626	148 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	ATP5G2	Q06055	141 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	C15orf32	Q32M92	178 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	OR5AU1	Q8NGC0	362 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	ZNF502	Q8TBZ5	544 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	FAM167A-AS1	Q96KT0	104 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	PAXX	Q9BUH6	204 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	SLC25A2	Q9BXI2	301 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	OR51M1	Q9H341	326 aa		10.78	□□□□□ -0.68
TPM1-215	ENST00000558868	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868		M0R036	132 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	OR2C1	O95371	312 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	UBE2G2	P60604	165 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	PNRC1	Q12796	327 aa	Predicted RBP	10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	CIART	Q8N365	385 aa	Predicted RBP	10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	TVP23C	Q96ET8	276 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	USMG5	Q96IX5	58 aa		10.77	□□□□□ -0.69
TPM1-215	ENST00000558868	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
TPM1-215	ENST00000558868		A0A1W2PRE2	83 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	FAM74A7	A6NL05	159 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	ZNF727	A8MUV8	499 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868		H3BQ15	152 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	SCO1	O75880	301 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	HNF1A	P20823	631 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	SRP14	P37108	136 aa	Known RBP	10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	BLCAP	P62952	87 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	UBE2L3	P68036	154 aa	Known RBP	10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	SCGB2A2	Q13296	93 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	RHEB	Q15382	184 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	FAM90A2P	Q658T7	463 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	ATRAID	Q6UW56	229 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	TMEM86B	Q8N661	226 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	TMEM190	Q8WZ59	177 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	RNF125	Q96EQ8	232 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	PRSS22	Q9GZN4	317 aa		10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	MRPL27	Q9P0M9	148 aa	Known RBP	10.76	□□□□□ -0.69
TPM1-215	ENST00000558868	TRAV5	A0A0B4J249	113 aa		10.75	□□□□□ -0.69
TPM1-215	ENST00000558868	TMEM89	A2RUT3	159 aa		10.75	□□□□□ -0.69
TPM1-215	ENST00000558868	OR2T8	A6NH00	312 aa		10.75	□□□□□ -0.69
TPM1-215	ENST00000558868		F8W735	103 aa	Predicted RBP	10.75	□□□□□ -0.69
TPM1-215	ENST00000558868	TRGV3	P03979	118 aa		10.75	□□□□□ -0.69

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