RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 HEYLQ9NQ87 328 aaPredicted RBP8.14□□□□□ -1.11
TPM1-212ENST00000558347 DPM3Q9P2X0 92 aa8.14□□□□□ -1.11
TPM1-212ENST00000558347 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 H0YJW9 148 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 CXorf1O96002 111 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 DIAPH2-AS1Q14236 149 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 TMEM95Q3KNT9 176 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 TPTE2P1Q5T6R2 138 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 OR10D4PQ8NGN7 298 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 OR4X1Q8NH49 305 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 TMEM170AQ8WVE7 144 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 PFDN5Q99471 154 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 SLC35D1Q9NTN3 355 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 TMEM140Q9NV12 185 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 APOA2P02652 100 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 HIST1H1BP16401 226 aaKnown RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 MC5RP33032 325 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 HSPE1P61604 102 aaKnown RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 HNF4GQ14541 408 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 RTL8BQ17RB0 113 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 PDPNQ86YL7 162 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 OR2T10Q8NGZ9 312 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 WIPF2Q8TF74 440 aaPredicted RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 RPEQ96AT9 228 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 PRSS22Q9GZN4 317 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 TMEM14BQ9NUH8 114 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 LSM4Q9Y4Z0 139 aaKnown RBP8.13□□□□□ -1.11
TPM1-212ENST00000558347 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
TPM1-212ENST00000558347 IGHV1-3A0A0C4DH29 117 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 A0A1W2PPI3 338 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
TPM1-212ENST00000558347 MT-CO2P00403 227 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 CD28P10747 220 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 REG1BP48304 166 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 RAB31Q13636 194 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 TMEM177Q53S58 311 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 OR1P1Q8NH06 330 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
TPM1-212ENST00000558347 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 MGST2Q99735 147 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 GPR61Q9BZJ8 451 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 ENY2Q9NPA8 101 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 PRNDQ9UKY0 176 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 ZNF257Q9Y2Q1 563 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 WASHC3Q9Y3C0 194 aa8.12□□□□□ -1.11
TPM1-212ENST00000558347 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 RRHO14718 337 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 NPPCP23582 126 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 NPY1RP25929 384 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 BRS3P32247 399 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
TPM1-212ENST00000558347 RHOBP62745 196 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 GNB1P62873 340 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
TPM1-212ENST00000558347 LINC01551Q86U37 167 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 SLC24A4Q8NFF2 622 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 HIST1H2BLQ99880 126 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 LY96Q9Y6Y9 160 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 TGP01266 2768 aa8.11□□□□□ -1.11
TPM1-212ENST00000558347 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 IGKV1-16P04430 117 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 AMY1AP04745 511 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 IL6RP08887 468 aaPredicted RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 FABP4P15090 132 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 AREGP15514 252 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 RPS16P62249 146 aaKnown RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 NSUN5P1Q3KNT7 163 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 GFI1BQ5VTD9 330 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 TEPPQ6URK8 271 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 SSX9Q7RTT3 188 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 C11orf52Q96A22 123 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 RHOVQ96L33 236 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 PACRGQ96M98 296 aaPredicted RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 RBM14Q96PK6 669 aaKnown RBP8.1□□□□□ -1.11
TPM1-212ENST00000558347 RNF5Q99942 180 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 FKBP11Q9NYL4 201 aa8.1□□□□□ -1.11
TPM1-212ENST00000558347 TRAV3A0A0B4J244 114 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 ARL14EPLP0DKL9 152 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 LGALS7P47929 136 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 PKIAP61925 76 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 CST9LP1Q5W188 147 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 OR4A47Q6IF82 309 aa8.09□□□□□ -1.11
TPM1-212ENST00000558347 SLC35E1Q96K37 410 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms