RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DTD1Q8TEA8 209 aa9.88□□□□□ -0.83
SNRPA1-204ENST00000558020 BCL7BQ9BQE9 202 aa9.88□□□□□ -0.83
SNRPA1-204ENST00000558020 HSPB7Q9UBY9 170 aa9.88□□□□□ -0.83
SNRPA1-204ENST00000558020 SHPKQ9UHJ6 478 aa9.88□□□□□ -0.83
SNRPA1-204ENST00000558020 FAM90A26D6RGX4 464 aa9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 NOL3O60936 208 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 NXPH3O95157 252 aa9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 PSG1P11464 419 aa9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 FAUP35544 74 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 ID1P41134 155 aa9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 USF2Q15853 346 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 CCDC59Q9P031 241 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-204ENST00000558020 AGRNO00468 2067 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 FABP12A6NFH5 140 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 ZFP92A6NM28 416 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 C4BPBP20851 252 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 OR8G2PQ6IF36 304 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 LYZL2Q7Z4W2 148 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 CSNK1G2-AS1Q8NCQ2 148 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 TMEM170AQ8WVE7 144 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 RNF125Q96EQ8 232 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 SLC35E1Q96K37 410 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 RBKSQ9H477 322 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 X6R8D5 127 aa9.86□□□□□ -0.83
SNRPA1-204ENST00000558020 SNRPGP15A8MWD9 76 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 H3BMM0 161 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 NKX2-1P43699 371 aaPredicted RBP9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 AP3S2P59780 193 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 RAB11AP62491 216 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 C1orf194Q5T5A4 169 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 PBDC1Q9BVG4 233 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
SNRPA1-204ENST00000558020 ELOA3CA0A087WX78 387 aaPredicted RBP9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 RPP30P78346 268 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 GAMTQ14353 236 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 SAMD13Q5VXD3 122 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 SPATA31B1PQ5VZV4 182 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 Q6ZTC4 211 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 PPP1R14BQ96C90 147 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 RNF126Q9BV68 326 aa9.84□□□□□ -0.83
SNRPA1-204ENST00000558020 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 DEFB131BA0A096LNP1 70 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 TMEM189A5PLL7 270 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 MED6O75586 246 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 CFDP00746 253 aaPredicted RBP9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 HLA-DRB4P13762 266 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 S100A7P31151 101 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 TNFSF8P32971 234 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 SUPT4H1P63272 117 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 MCFD2Q8NI22 146 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 LINC00052Q96N35 136 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR13Q9NZ81 148 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 HLA-DRB4X5D2U9 266 aa9.83□□□□□ -0.84
SNRPA1-204ENST00000558020 KMT2AQ03164 3969 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PSMB3P49720 205 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR20EP86478 221 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR20CP86479 221 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR20DP86480 221 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR20BP86481 221 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 PRR20AP86496 221 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 GGNBP1Q5YKI7 109 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 TMED4Q7Z7H5 227 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 OR8I2Q8N0Y5 310 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 CLUHP3Q96NS8 147 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 NEU1Q99519 415 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 SOSTQ9BQB4 213 aa9.82□□□□□ -0.84
SNRPA1-204ENST00000558020 FRAS1Q86XX4 4008 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 P0DMU3 169 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 FAM231AP0DMU4 169 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 FAM231CP0DMU5 169 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 SLC25A6P12236 298 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 VAMP1P23763 118 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 LYZP61626 148 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF90Q03938 601 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 PYDC2Q56P42 97 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 EBLN2Q6P2I7 272 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 TOMM5Q8N4H5 51 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 DEDD2Q8WXF8 326 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 SLC25A21Q9BQT8 299 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 NDUFAF3Q9BU61 184 aa9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 SLIRPQ9GZT3 109 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 PAIP2BQ9ULR5 123 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-204ENST00000558020 TEX48A0A1B0GUV7 120 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 ISLRO14498 428 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 IGKV3-20P01619 116 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 MEOX2P50222 304 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF705AQ6ZN79 300 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms