RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 C7orf66A4D0T2 115 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3-48P01763 117 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 HOXB5P09067 269 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 NPPCP23582 126 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 CRYBB3P26998 211 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 HOXA1P49639 335 aaPredicted RBP4.85□□□□□ -1.63
SLIRP-203ENST00000554074 TAS2R30P59541 319 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 ID3Q02535 119 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 OXA1LQ15070 435 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM41BQ5BJD5 291 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 SPINK9Q5DT21 86 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 GSG1LQ6UXU4 331 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 Q6ZRM9 215 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 RNASEH2CQ8TDP1 164 aaKnown RBP4.85□□□□□ -1.63
SLIRP-203ENST00000554074 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 RARRES2Q99969 163 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 MFFQ9GZY8 342 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 MS4A6AQ9H2W1 248 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 FNDC4Q9H6D8 234 aaPredicted RBP4.85□□□□□ -1.63
SLIRP-203ENST00000554074 PUS1Q9Y606 427 aaKnown RBP eCLIP4.85□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3OR16-13A0A075B7E8 117 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3-74A0A0B4J1X5 117 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 A0A0G2JRQ6 117 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 CEBPZOSA8MTT3 80 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 K7EQG2 157 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 SYNGR2O43760 224 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 LY6G6CO95867 125 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 IGKV1-17P01599 117 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 APOHP02749 345 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 SLC25A4P12235 298 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 OPRK1P41145 380 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 NKX2-1P43699 371 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 TFPI2P48307 235 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 EIF2B2P49770 351 aaKnown RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 TCTAP57738 103 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 DEFB131AP59861 70 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 YPEL3P61236 119 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 ZNF124Q15973 351 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 IAH1Q2TAA2 248 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 C2orf83Q53S99 150 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 ETFRF1Q6IPR1 90 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 LILRB2Q8N423 598 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 GBGT1Q8N5D6 347 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 OR4D5Q8NGN0 318 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 DTD1Q8TEA8 209 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 PHLDA1Q8WV24 401 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 NARS2Q96I59 477 aaKnown RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 C2orf50Q96LR7 162 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 METTL26Q96S19 204 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 RAB40CQ96S21 281 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 SEC22CQ9BRL7 303 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 NMES1Q9C002 83 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 HEYLQ9NQ87 328 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 MRPL36Q9P0J6 103 aaKnown RBP4.84□□□□□ -1.63
SLIRP-203ENST00000554074 U3KQE9 123 aa4.84□□□□□ -1.63
SLIRP-203ENST00000554074 IGKV3-7A0A075B6H7 116 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 C5orf51A6NDU8 294 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 HELTA6NFD8 242 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 WRBO00258 174 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 SSNA1O43805 119 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 CA1P00915 261 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 IGLC1P0CG04 106 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 PET100P0DJ07 73 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 SPP1P10451 314 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 PVALBP20472 110 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 GPX4P36969 197 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 P2RY1P47900 373 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 AP2S1P53680 142 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 RAB11AP62491 216 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 RPL11P62913 178 aaKnown RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 LGALS9CQ6DKI2 356 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 STHQ8IWL8 128 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 ZBTB8BQ8NAP8 495 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 OR1S2Q8NGQ3 325 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 C11orf45Q8TAV5 145 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 DCANP1Q8TF63 244 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 SMIM8Q96KF7 97 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 RBKSQ9H477 322 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 SEPSECSQ9HD40 501 aaKnown RBP4.83□□□□□ -1.64
SLIRP-203ENST00000554074 PRR13Q9NZ81 148 aa4.83□□□□□ -1.64
SLIRP-203ENST00000554074 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
SLIRP-203ENST00000554074 IGHV3-66A0A0C4DH42 116 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 FNDC10F2Z333 226 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 TSC22D2O75157 780 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 ADAP1O75689 374 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 IFNA10P01566 189 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 RLN2P04090 185 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 IFNA4P05014 189 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
SLIRP-203ENST00000554074 MIFP14174 115 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 NPY1RP25929 384 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 IL15RAQ13261 267 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 MLANAQ16655 118 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 TIGITQ495A1 244 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms