RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 H0Y980 276 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 GABARAPH6UMI1 98 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 CTDSPLO15194 276 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 ST8SIA3O43173 380 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 TGOLN2O43493 480 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 GSTZ1O43708 216 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 KRASP01116 189 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 IGKV1-17P01599 117 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 IGHV3-48P01763 117 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 OR13C7P0DN81 318 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 CBLN1P23435 193 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 FCGR2BP31994 310 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 MRPS15P82914 257 aaKnown RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 PNRC1Q12796 327 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 SP6Q3SY56 376 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 NMSQ5H8A3 153 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 DEFB121Q5J5C9 76 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 CASC10Q5T4H9 136 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 BTNL8Q6UX41 500 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 CLVS1Q8IUQ0 354 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 DEFB125Q8N687 156 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM229BQ8NBD8 167 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 OR6Q1Q8NGQ2 317 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 MARCH1Q8TCQ1 289 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 OR10C1Q96KK4 312 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 VGLL1Q99990 258 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 IFT46Q9NQC8 304 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 SLC2A8Q9NY64 477 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 PRELID3BQ9Y3B1 194 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 RBM7Q9Y580 266 aaKnown RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
SCAF11-214ENST00000550893 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 IGKV1D-37A0A075B6S9 117 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 OR2T8A6NH00 312 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 CRYM-AS1A6NIL9 109 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 PRSS46E5RG02 174 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 GGCTO75223 188 aaKnown RBP3.53□□□□□ -1.84
SCAF11-214ENST00000550893 CDS2O95674 445 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 HRASP01112 189 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 CTSDP07339 412 aaPredicted RBP3.53□□□□□ -1.84
SCAF11-214ENST00000550893 OR5AC1P0C628 307 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 RORCP51449 518 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 TMBIM6P55061 237 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 PIGPP57054 158 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 HERV-K104P61576 105 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 ATP5G2Q06055 141 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 CATR1Q13166 79 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 MEF2DQ14814 521 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 RPEL1Q2QD12 228 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 FAM219AQ8IW50 185 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 SLC38A6Q8IZM9 456 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 Q8N402 240 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 ARRDC1Q8N5I2 433 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 OR1L8Q8NGR8 309 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 VSTM2AQ8TAG5 236 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 PHB2Q99623 299 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 DCUN1D5Q9BTE7 237 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM222Q9H0R3 208 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 HRASLSQ9HDD0 168 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF355PQ9NSJ1 428 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 GPR132Q9UNW8 380 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 OR51B2Q9Y5P1 312 aa3.53□□□□□ -1.84
SCAF11-214ENST00000550893 NACAE9PAV3 2078 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 IGKV1OR2-108A0A075B7D4 117 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF207O43670 478 aaKnown RBP3.52□□□□□ -1.85
SCAF11-214ENST00000550893 PITX3O75364 302 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 MT-CO2P00403 227 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TRAPPC2P0DI81 140 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TRAPPC2BP0DI82 140 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TBPP20226 339 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 RANBP1P43487 201 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 HSPE1P61604 102 aaKnown RBP3.52□□□□□ -1.85
SCAF11-214ENST00000550893 ANKRD55Q3KP44 614 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 STEAP1BQ6NZ63 245 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 GPR141Q7Z602 305 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
SCAF11-214ENST00000550893 UXS1Q8NBZ7 420 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR51S1Q8NGJ8 323 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR2K2Q8NGT1 345 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR6F1Q8NGZ6 308 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR1P1Q8NH06 330 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR5B3Q8NH48 314 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TERB2Q8NHR7 220 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 MUC7Q8TAX7 377 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 RAB2BQ8WUD1 216 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 LSM10Q969L4 123 aaKnown RBP3.52□□□□□ -1.85
SCAF11-214ENST00000550893 GPR146Q96CH1 333 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF486Q96H40 463 aaPredicted RBP3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TMEM56Q96MV1 263 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OR4C12Q96R67 309 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 ATP6V0BQ99437 205 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 BCL7BQ9BQE9 202 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 OVOL2Q9BRP0 275 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 SRRQ9GZT4 340 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 HRH4Q9H3N8 390 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 VSIRQ9H7M9 311 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms