RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 DTX2Q86UW9 622 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 TAS2R60P59551 318 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 CTAG1AP78358 180 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 MMDQ15546 238 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 CFHR4Q92496 578 aa11.08□□□□□ -0.64
MSH2-206ENST00000543555 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
MSH2-206ENST00000543555 KLRD1Q13241 179 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
MSH2-206ENST00000543555 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 ODF3BA8MYP8 253 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 ISLRO14498 428 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 PRTN3P24158 256 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 CEACAM3P40198 252 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
MSH2-206ENST00000543555 PEX7O00628 323 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 HYPMO75409 117 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
MSH2-206ENST00000543555 ADMP35318 185 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 PLP1P60201 277 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 GSX1Q9H4S2 264 aaPredicted RBP11.06□□□□□ -0.64
MSH2-206ENST00000543555 I3L2K1 104 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
MSH2-206ENST00000543555 CBLN1P23435 193 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 NBR2O15453 112 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 CNIH1O95406 144 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 MYCNOSP40205 109 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
MSH2-206ENST00000543555 PTPN13Q12923 2485 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
MSH2-206ENST00000543555 IGLC1P0CG04 106 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 FXYD3Q14802 87 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
MSH2-206ENST00000543555 OR1L6Q8NGR2 347 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 FBN2P35556 2912 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 COL8A1P27658 744 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
MSH2-206ENST00000543555 SRSF1Q07955 248 aaKnown RBP eCLIP11.05□□□□□ -0.64
MSH2-206ENST00000543555 NPBQ8NG41 125 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 PRDM13Q9H4Q3 707 aa11.05□□□□□ -0.64
MSH2-206ENST00000543555 NDUFA3O95167 84 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
MSH2-206ENST00000543555 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 IGFBPL1Q8WX77 278 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 PSG1P11464 419 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 CD24P25063 80 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
MSH2-206ENST00000543555 GBGT1Q8N5D6 347 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 BLNKQ8WV28 456 aa11.04□□□□□ -0.64
MSH2-206ENST00000543555 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
MSH2-206ENST00000543555 A0A1W2PRD5 423 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 A0A1W2PRF3 423 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 A0A1W2PRM7 423 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 FRMD6-AS1P0C7T7 363 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 GP9P14770 177 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 CDKN1AP38936 164 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 CX3CL1P78423 397 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 TRAV34A0A0B4J273 112 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 IER3P46695 156 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 GNG5P63218 68 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 C1orf122Q6ZSJ8 110 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 EPDR1Q9UM22 224 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 HIGD1AQ9Y241 93 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 HECTD1Q9ULT8 2610 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 TRBV9A0A0B4J1U6 114 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 A0A1B0GUS0 222 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 RD3LP0DJH9 198 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 HES1Q14469 280 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 KIR3DL3Q8N743 410 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 OR5R1Q8NH85 324 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
MSH2-206ENST00000543555 PGPA6NDG6 321 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 K7EIM0 57 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.65
MSH2-206ENST00000543555 LYZP61626 148 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
MSH2-206ENST00000543555 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 VMO1Q7Z5L0 202 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 NDUFS7O75251 213 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 GZMBP10144 247 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 TCL1AP56279 114 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
MSH2-206ENST00000543555 GNB1LQ9BYB4 327 aa11.02□□□□□ -0.65
MSH2-206ENST00000543555 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 587.8 ms